Pseudomonas trivialis: AA957_08100
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Entry
AA957_08100 CDS
T04006
Name
(GenBank) RNA-binding protein S4
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptv03009
]
AA957_08100
Enzymes [BR:
ptv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
AA957_08100
Ribosome biogenesis [BR:
ptv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AA957_08100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
UPF0367
Motif
Other DBs
NCBI-ProteinID:
AKS06067
UniProt:
A0A0H5APB9
LinkDB
All DBs
Position
1822505..1823215
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AA seq
236 aa
AA seq
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MTDPIRLSKRLIELVGCSRREAELFIEGGWVSVDGEVIDEPQFKVTTQKVELDPEAKATV
PEPVTILLHAPVGVDAETAMASISAETLSEEHRFSKRPLKGHFLRLTASADLQAKASGLL
VFTQDWKILRKLTADAAKIEQEYVVEVEGDMVAHGLNRLNHGLTYKGKELPAVKASWQNE
NRLRFAMKNPQPGVIALFCEAVGLKVIAIRRIRIGGVSIGKVPVGQWRYLSSKEKF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccatacgcctctccaaacgccttatcgaactggtcggttgctcccgtcgg
gaggctgagctgttcatcgaaggcggctgggtctcggtggacggtgaagtgatcgacgag
ccgcagttcaaggtcaccacccagaaggtcgaactcgaccccgaggccaaggccaccgtg
cccgagccggtgaccatcctgctgcacgcccccgtcggcgtagacgccgaaacggccatg
gcgtcgatcagcgccgaaacgctctcggaagaacaccgcttcagcaagcgcccgctcaag
ggccatttcctgcgcctgaccgccagcgccgacctgcaagccaaggccagcggccttctg
gtgtttacccaggattggaagattctgcgcaagctgaccgccgatgccgccaagatcgag
caggaatacgtggtggaagtcgagggcgacatggttgcccacggcctcaaccgcctgaac
cacggcctgacttacaaaggcaaggagctgccggccgtcaaagccagctggcagaacgaa
aaccgcctgcgctttgcaatgaaaaacccgcagccgggcgtgatcgcgctgttttgcgaa
gcggtaggcctcaaggtcatcgccattcgtcgtatccgcatcggcggcgtgtctatcggc
aaagtaccggttggccaatggcgctacctgtccagcaaagagaagttctaa
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