Pseudomonas trivialis: AA957_08690
Help
Entry
AA957_08690 CDS
T04006
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AA957_08690 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptv03019
]
AA957_08690 (rnc)
03009 Ribosome biogenesis [BR:
ptv03009
]
AA957_08690 (rnc)
03036 Chromosome and associated proteins [BR:
ptv03036
]
AA957_08690 (rnc)
Enzymes [BR:
ptv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AA957_08690 (rnc)
Messenger RNA biogenesis [BR:
ptv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AA957_08690 (rnc)
Ribosome biogenesis [BR:
ptv03009
]
Eukaryotic type
90S particles
RNase
AA957_08690 (rnc)
Prokaryotic type
rRNA processing factors
AA957_08690 (rnc)
Chromosome and associated proteins [BR:
ptv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AA957_08690 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AKS06180
UniProt:
A0A0H5A9B9
LinkDB
All DBs
Position
complement(1961291..1961980)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMETAKERVVAWLASEIESLTLVDTNKDPKTRLQEYLQSRGCELPRYEVVDIQG
EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctttaagtcgtctcgagcgccagctcggctacaccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagctttgcagggcgcaacaacgagcgcctggaa
ttcctcggtgatgccatcctcaactttgccgccggtgaggcgctcttcgagcgtttccct
caagcgcgcgaaggccagctctcgcgcttgcgtgcgcgtctggtgaaaggcgagaccctg
gccgtgctggcccgtggtttcggcctgggcgaatacctgcggctgggttccggtgaattg
aaaagcggtggcttccgtcgcgagtcgatcctggcggatgcccttgaggcgttgatcggt
gcgatctacctcgatgcaggcatggagacggccaaggagcgcgtggtcgcctggctggcc
tcggaaatcgaaagcctgacgctggtcgacaccaacaaagatcccaagacccgcctgcag
gaatacctgcagtcccgtggttgcgaactgccacgttacgaagtggtggatatccagggt
gagccgcattgccgcgtgttcttcgtggaatgtgaaatcaccttactgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga
DBGET
integrated database retrieval system
