Pseudomonas trivialis: AA957_09275
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Entry
AA957_09275 CDS
T04006
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv00470
D-Amino acid metabolism
ptv00550
Peptidoglycan biosynthesis
ptv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AA957_09275 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AA957_09275 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptv01011
]
AA957_09275 (murD)
Enzymes [BR:
ptv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AA957_09275 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptv01011
]
Precursor biosynthesis
Amino acid ligase
AA957_09275 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AKS06292
UniProt:
A0A0H5APY6
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All DBs
Position
complement(2087739..2089085)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELVTLRRDYPHVEVRCG
ELDVEFLCRADELYVSPGLAIATPALQAAAARGVKLSGDIDLFARNAKAPIIAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTHDLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLMGEGMPCWTFGLSKPD
FKAFGIREENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSAL
RTFGGLEHRCQWVRDLDGVNYYNDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAD
FKDLKGPVAAHCRAVVLMGRDADLIAAALGEGVPQVRANSLDDAIAQCKALAQPGDAVLL
SPACASFDMFKNYEERGQLFARAVEALA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgcttcagaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggctgacacgcgggaa
aatccaccggagctggtcacgctgcgccgtgactacccgcacgtggaagtgcgttgtggc
gagctggatgtcgagtttctgtgccgtgccgacgagctctacgtgagccccggcctggca
atcgcgacaccggccctgcaagcggcagcggcgcggggcgtgaagctgtccggcgacatt
gacctgttcgcacgtaacgcgaaggcaccgatcatcgccatcagcggctcgaatgcgaaa
agcaccgtgaccaccctggtcggcgagatggcggctgcggccggcaagcgcgtggcggtg
ggcggcaacctcggcacgccggcgctggacctgttgagcgacgacgtcgagctttacgtg
atggagctgtcgagcttccagctggaaacgactcacgacctcggtgctgaagtcgccacc
gtattgaacgtcagcgaagatcacatggaccgctacagcggcctgccggcttaccatctg
gccaagcaccggattttccgcggtgccaggcaagtggtggtcaatcgccaggatgcattg
agccgtccgctgatgggcgagggcatgccgtgctggaccttcggcctgagcaagccggat
ttcaaagccttcggcatccgcgaagagaacggcgagaaatacctggccttcgaattccag
aacctgatgccggtgcgtgagctgaaaatccgtggcgcccataaccagtccaacgccctg
gcggccttggcgctcggccatgccgtgggcctgccgttcgacgctatgttgtcggccctg
cgcaccttcggcggccttgagcatcgctgccagtgggtccgcgacctggatggcgtgaac
tattacaacgattccaaggccaccaacgtcggtgccgccctggctgccatcgagggcctt
ggcgccgacatcgaaggcaagctggtactgatcgcaggcggcgacggcaaaggtgcggac
ttcaaggacctcaaaggtcctgtcgctgcacattgccgtgccgtggtgctgatgggccgc
gatgctgacttgatcgctgcagcgttgggcgaaggcgtgccgcaagtacgtgccaattcc
ctggacgacgccatcgcccagtgcaaagccctggcccagccgggcgatgcggtgctgctg
tcgccggcatgcgcgagtttcgacatgttcaagaactacgaagagcgcggccagctgttc
gcccgcgccgtggaggccttggcatga
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