Pseudomonas trivialis: AA957_11005
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Entry
AA957_11005 CDS
T04006
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptv03000
]
AA957_11005
03036 Chromosome and associated proteins [BR:
ptv03036
]
AA957_11005
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_11005
Transcription factors [BR:
ptv03000
]
Prokaryotic type
Helix-turn-helix
Other families
AA957_11005
Chromosome and associated proteins [BR:
ptv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AA957_11005
DNA repair and recombination proteins [BR:
ptv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AA957_11005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
DUF6507
Xre-like-HTH
UPF0175
Motif
Other DBs
NCBI-ProteinID:
AKS06617
UniProt:
A0A0H5AQS1
LinkDB
All DBs
Position
2452104..2452424
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AA seq
106 aa
AA seq
DB search
MTMMTETLVSGTAPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgaccgagactttagtgagtggaacagcacccgtgagcgacaacgtcaat
ttgaaacagcacctcaacacgccgagcgaagaaggccagacccttcgcgggagtgtcgag
aaggcgctgcacaattatttcgcccaccttgagggcgcttccgtcacggacgtgtacaac
ctggtgctctccgaagtcgaggcgcccttgctcgaaagcgtgatgaactacgtcaagggc
aaccagaccaaagccagtgagctgctgggcctcaaccgtggcaccttgcgcaaaaagctc
aagcaatacgatttgctgtaa
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