KEGG   Pseudomonas trivialis: AA957_15025
Entry
AA957_15025       CDS       T04006                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ptv  Pseudomonas trivialis
Pathway
ptv02025  Biofilm formation - Pseudomonas aeruginosa
ptv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ptv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AA957_15025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AA957_15025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptv02044]
    AA957_15025
Secretion system [BR:ptv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AA957_15025
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AKS07368
UniProt: A0A0H5ABF2
LinkDB
Position
complement(3362733..3363221)
AA seq 162 aa
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGGGGGAGKVNIQDLSLTK
YVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMVINLEEVLVTSLSTGGSGTDDR
LTENVTLNFAQVMVDYQPQKADGTKDGGAIKFGWNIRSNTKR
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatattttcatcaagatcggcgacatcaagggcgagtccatggacaaggcc
cacaaggacgaaatcgacgtactgaactggagctggggcatggcccagtccggcaacatg
cacgttggcggtggcggcggcgcgggcaaggtgaatatccaggacctgtcgctgaccaag
tacgtcgacaaggcttcgccgaacctgatgatgcactgcgccagcggcaagcacatcgac
aaggtcaagctgaccgtgcgcaaggccggcggcgaaagccaggtcgagtacatggtgatc
aacctggaagaagtgctggtcacctcgctgagcaccggcggttcgggcaccgatgaccgc
ctgaccgaaaacgtcaccctgaacttcgcccaagtgatggtcgactaccaaccgcagaaa
gccgacggcaccaaagacggcggcgcaatcaagtttggctggaacatccgttccaacacc
aagcgctga

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