Pseudomonas trivialis: AA957_18140
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Entry
AA957_18140 CDS
T04006
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ptv
Pseudomonas trivialis
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptv03009
]
AA957_18140
Enzymes [BR:
ptv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
AA957_18140
Ribosome biogenesis [BR:
ptv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AA957_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKS07962
UniProt:
A0A0H5AU76
LinkDB
All DBs
Position
4013165..4013800
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AA seq
211 aa
AA seq
DB search
MSRPTRPDSRRPGVKPPHSAARRVAKAPPAEPKLILFNKPFDVLTQFSDEGGRATLKDFI
DIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTEEQLQRLRD
GVELNDGKTLPAEARQLEEPELWPRNPPVRFRKSVPTHWLELVIREGRNRQVRRMTAAVG
LPTLRLVRVRIGDWTIDGLDQGQWKEVPARL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcccacccgtcccgattcgcgccgccctggcgtgaaacctccgcattccgcc
gcccgtcgtgtcgccaaggcaccgccggccgagccgaagttgatcctgttcaataaaccg
ttcgacgtgctgacccagttcagcgacgaaggcggtcgcgcgaccctcaaggactttatc
gacatccccggcatttacccggccggtcgcctggaccgtgacagcgaaggcctgttgctg
ctgaccaacgatggccagttacaggcgcgcattgccgaccccaagcacaaactggcgaaa
acctactgggtacaggtggaaggcgagccgaccgaagaacagctgcaacgcctgcgtgac
ggcgtcgagctgaatgacggcaagaccttgcccgccgaagcacggcagttggaagagccc
gagttatggccgcgcaacccgcccgtgcggttccgcaaaagcgtgcccactcattggttg
gagttggtgattcgagaagggcgcaaccgtcaggtgcggcgcatgaccgccgccgtgggc
ttgcccaccttgcggctggtacgcgtgcggattggcgattggacaattgatggcctggat
caaggccagtggaaggaagtaccggcgcgcttataa
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