Pseudomonas trivialis: AA957_18930
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Entry
AA957_18930 CDS
T04006
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptv
Pseudomonas trivialis
Pathway
ptv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AA957_18930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptv03400
]
AA957_18930
Enzymes [BR:
ptv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AA957_18930
DNA repair and recombination proteins [BR:
ptv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AA957_18930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
AAA_22
Viral_helicase1
UvrD-helicase
AAA_17
SLFN-g3_helicase
AAA_16
T2SSE
AAA_28
AAA_25
AAA_5
NTPase_1
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
AKS08106
UniProt:
A0A0H5AAW3
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All DBs
Position
4196832..4198904
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AA seq
690 aa
AA seq
DB search
MSLSPLPLEELMPLSRATDLVQLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAS
SHLVALAVDGSETAQSRPLVLSGKRLYLRRYWTYERRIDTALRLRLATQESVAADLPQRL
NSLFDQPPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVETGSP
LRIRLAAPTGKAAARLTESISQQVLSLKVPNSVKEKIPTQVTTVHRLLGSRPGTRHFRHH
IGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGFYNAQTRQWLQAVSGEDLSASGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNADEARKLLAARSHSDLFCISLKGEHDHALERLVLDGQGSDGAQGYRYYLNLLQ
SARPSPDTPREAPAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIE
GDEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVL
PSRLNDVETVYAMTVHKSQGSEFVHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPR
GGVFEEAVRRKVKRLSGLMLELGHESEKTD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgttaccgcttgaggaactgatgccgctcagccgtgccaccgacttg
gtgcaactgctggagcgttgggtggatcgtggttggctgcgcgctctggacaaagccttc
gtcggcttcctgcacgaacttgatccgcaggctgacccgctggtgctgctggcagccgcg
ctgaccagccatcaattgggtcatggtcacgtttgcctcgacctgttcgaaaccctcaag
gcgccggatttcgctctgtccttgccacccgaaggcgacctgcaaaccggtgccatgctg
ctaccgtcgcaattgcttgatggcctcgacggcgcccactggtgccatgccctggcctca
agccacttggtcgcgctggccgtcgatggcagtgaaactgcccaaagccgtccgctggtc
ctgtccggcaagcgcctgtatctgcgccgttactggacctacgaacggcgcatcgacacc
gccttgcgcctgcgtctcgccactcaggaaagtgtcgccgccgatttgccgcagcgcctg
aacagcctgttcgaccaaccaccgcccgacggcgtgatcgactggcagaaacttgcctgc
gccctggctactcgcggtgcattcagcatcgtcactggtggccccggcaccggcaagacc
actaccgtggtacgcctgctcgcactgttacaggctccagccgtggaaaccggcagcccg
ttgcgcatccggctggctgcgcctactggtaaagcggcagcacgcctcactgagtccatt
agccagcaagtgctgtcgctgaaagtgccgaacagcgtgaaggaaaaaatcccaacgcaa
gtcaccaccgtccaccgcttgctgggcagtcgcccgggcacgcggcacttccgtcatcac
attggcaacccactgccgctggatgtgctggtagtggatgaagcctcgatgatcgacctt
gaaatgatggccaacctgctggacgccttgccaccccatgcgcgtctggtattgctcggt
gacaaagaccaacttgcttcggtagaagcgggcgctgttctcggtgatttgtgccgagac
gccgaagccggcttttataacgcccagacccgccaatggctgcaagccgtcagcggcgaa
gacctcagcgccagtggcctgcaagaggacctcgacggcagccatcccctggctcagcaa
gtggtgatgctgcgttactcgcggcgtttcggcgaaggcagcggcatcggccaactggcg
cgttgggtcaaccagcaaaacgccgacgaagcgcgcaaactgctggcggcgcgcagtcac
agtgacctgttctgcatcagcctcaagggcgagcacgaccacgccctggagcgacttgtg
cttgacgggcagggtagcgacggcgcccaaggttatcgttactacctcaacctgctgcaa
agcgcgcgtccatctcccgacaccccacgcgaagcccccgcctggacccactgggcgcaa
caactgctgcaagccttcgacgctttccagctgctctgcgcggtccgcaaaggcccctgg
ggcgtggaagggttgaacctgcgcatcaccgccgccttgcgcaaagtgcggctgatcgaa
ggcgacgagcaatggtacgaaggtcgcccagtgctcatgacccgcaacgactacggcctg
ggcctgatgaacggtgatatcggcatcgccctcaaattgcctgaaagcgacggcggcccg
caggtactgcgcgtggccttcccgcgtaacgatggccagggcggtgtgcgctttgtgctg
cccagccgtctgaatgatgtggaaaccgtgtacgccatgaccgtgcataaatcccagggc
tcggagttcgtccacacggcattgatcctgccggatgccctcaacccggtgctcaccaaa
gaactgatctacaccggcattacccgggccaagcgctggttcagcctgatcgagccgcgt
ggcggcgtgtttgaagaagcggtaaggcgcaaggtcaagcgcttgagtgggttgatgctt
gaactggggcacgaatcagaaaaaactgactga
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