KEGG   Pseudomonas trivialis: AA957_24695
Entry
AA957_24695       CDS       T04006                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
ptv  Pseudomonas trivialis
Pathway
ptv00250  Alanine, aspartate and glutamate metabolism
ptv00310  Lysine degradation
ptv00350  Tyrosine metabolism
ptv00650  Butanoate metabolism
ptv00760  Nicotinate and nicotinamide metabolism
ptv01100  Metabolic pathways
ptv01120  Microbial metabolism in diverse environments
Module
ptv_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:ptv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    AA957_24695 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    AA957_24695 (gabD)
   00310 Lysine degradation
    AA957_24695 (gabD)
   00350 Tyrosine metabolism
    AA957_24695 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    AA957_24695 (gabD)
Enzymes [BR:ptv01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     AA957_24695 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     AA957_24695 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     AA957_24695 (gabD)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-ProteinID: AKS09181
UniProt: A0A0H5ADQ0
LinkDB
Position
5427784..5429244
AA seq 486 aa
MLKNRLQDPSLLAELAYVDGQWIAADSGATLDVRDPATGHLLAQVPAMDAVDTRRAIEAA
ERAWPAWRARPAADRAALLERWYQAMIDNLDDLALIMTSEQGKPLNEARGEVRYGAGFVK
WFAEEARRVYGETMPAPSGDRRLLTLKQPVGVCAAITPWNFPNAMITRKCAPALAAGCPI
IVKPSDLTPLSALALAVLAERVGIPAGVFNVITGLPAGIGAELTGNPAVRKISFTGSTAV
GRLLMRQSAEHIKRLSLELGGNAPFVVFDDADLEQAVAGVMISKFRNAGQTCVCANRILV
QDGIYARFAARLVEEVGKLKVGNGLEDGVTIGPLINPAAVSKVARHIDDALSQGAQLLCG
AIPAGDSQFVQPTVLGDAHAGMLLANEETFGPVAPLMRFTDEAEALALANATPYGLGAYY
FTQDLQRSWRFGEALEFGMVGLNTGIISMEVAPFGGIKQSGLGREGSKYGLDEYLEVKAF
HIGGLN
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgctcaagaatcgcttgcaagaccccagcctgctggctgaactcgcctacgtagatggc
cagtggatcgctgccgacagcggcgccaccctggacgtccgcgaccccgctaccggccac
ttgctggcccaggtcccggccatggacgcagtcgacacgcgccgcgccatcgaagccgcc
gaacgggcctggcccgcctggcgtgcgcgccctgcggcagaccgcgcggcgctgctggag
cgctggtaccaggcgatgatcgacaacctcgacgacctggcgctgatcatgaccagcgag
cagggcaagccgctcaacgaagcccgcggcgaagtgcgctacggcgccggtttcgtcaaa
tggttcgccgaggaagcgcgtcgggtctacggcgaaaccatgccggcgccgagtggcgat
cgccgtctgctgaccctcaagcaaccggtgggcgtatgcgctgccatcaccccgtggaat
ttccccaacgcgatgatcacccgcaaatgcgcacccgcgctggcggcggggtgcccgatc
atcgtcaaaccgtcggaccttacaccgctgtcggccctggccctggcggtgttggctgag
cgcgtcggcatcccagcgggggtgttcaatgtgatcaccgggctgcccgccggcatcggc
gcagagctgaccggcaacccggcggtgcgcaagatctcctttaccggctccacggcggtg
ggccgcttgttgatgcgccagagcgccgagcacatcaagcgcctgagcctggaattgggc
ggcaatgcgccgtttgtggtgttcgatgacgccgacctggaacaggcggtggctggcgtg
atgatcagcaaattccgcaacgccgggcaaacctgcgtgtgcgccaaccgcatcctcgtg
caagacggcatctacgcgcgttttgccgcgcgcctagtggaagaggtgggcaagctcaag
gtcggcaacggcctggaagacggcgtgaccatcggcccgctgatcaaccctgcggcggtg
agcaaagtggcgcggcatatcgacgatgccttgagccagggtgcccaattgttgtgtggc
gcgatccctgctggcgacagccagttcgtgcaacccacggtgctgggggacgcccatgcc
gggatgttactggccaatgaagaaaccttcggcccggtggcgccgttaatgcgctttacc
gatgaggccgaggcgctggccctggccaatgccacgccgtatggccttggcgcctactat
ttcacccaggacttgcagcgttcgtggcgctttggcgaggccctggagttcggcatggtc
gggctcaacaccgggatcatctcgatggaagtcgcgccgttcggcggcatcaagcaatcg
gggctgggtcgcgagggcagcaagtacggcctggacgagtaccttgaagtcaaagccttc
cacatcggcggcttgaactga

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