Pseudomonas tohonis: TUM18999_00900
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Entry
TUM18999_00900 CDS
T07887
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03030
DNA replication
ptw03410
Base excision repair
ptw03420
Nucleotide excision repair
ptw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM18999_00900 (polA)
03410 Base excision repair
TUM18999_00900 (polA)
03420 Nucleotide excision repair
TUM18999_00900 (polA)
03440 Homologous recombination
TUM18999_00900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptw03032
]
TUM18999_00900 (polA)
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_00900 (polA)
Enzymes [BR:
ptw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM18999_00900 (polA)
DNA replication proteins [BR:
ptw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TUM18999_00900 (polA)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TUM18999_00900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM18999_00900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BCG21899
UniProt:
A0A6J4DXX4
LinkDB
All DBs
Position
86222..88969
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSAGLPTGAVKGVLNMLKSLRKQYPESPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDELRVQVEPLHATVRALGLPLLCVEGVEADDVIGTLAR
QSAALGRAVVISTGDKDMAQLVDGHITLVNTMTGSVLDIDGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLDVLYASLDKVPELAIRGAKGLPAKLEEHKEM
AYLSYKLATIKCDVELNVEIEALHPGEPDLEALAELYRTLEFKTGLDDLQRQAKSAGETL
PPPVQPAEAVETRYETVLDQAQFDAWLKKLQDAPLFAFDTETTSLDPQQAQLVGVSFAVS
PHEAAYVPLAHSYMGVPEQLDRDAVLEALKPLLEDPAKGKIGQHAKYDMNVLANASTPIL
MQGIAFDTMLESYVLDSTATRHDMDSLSLKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQA
GPYAAEDSDITLRLHQTLWQKLEATPSLASVFRDIEMPLVPVLARIERNGAYVDARLLGQ
QSIELGARMVELERQAYELAGQEFNLGSPKQLGAILYEKLGLPVLSKTATGQPSTAENVL
AELAEQDFELPKVIMQYRTVSKLKSTYTDKLPEQINPRTGRIHTSYHQAVAATGRLSSTD
PNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDRDV
HRATAAEVFGVELEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYIDRYFA
RYPGVLAYMERTREQAAQQGFVETLFGRRLYLPEINSKNQAMRKGAERTAINAPMQGTAA
DIMKRAMVAVDNWLSESGLDARVILQVHDELVLEVREDLVEQVREAIRPLMSGAAQLDVP
LLVEVGVGDNWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccctctcgtcctggtggacggttcctcctacttgtaccgcgcctttcat
gccctgcccccgctgaccacctccgccggcctgccgacgggcgcggtcaagggcgtgctg
aacatgctgaaaagcctgcgcaagcagtacccggaaagccccttcgcggtggtcttcgac
gccaagggcgggaccttccgtgacgagatgttcgccgagtacaaggccaaccggccgtcg
atgccggacgagctgcgggtgcaggtcgagccgctgcacgccaccgtgcgcgcactgggc
ctgccgctgctgtgcgtggagggcgtggaggccgacgacgtgatcggcaccctcgcccgg
cagagcgcggcgctggggcgcgcggtggtcatttccaccggcgacaaggacatggcgcag
ctggtcgacgggcacattacgctggtcaacaccatgaccggaagcgtgctggacatcgat
ggcgtgaaagagaaattcggcgtcggtcctgagctgatcatcgactacctggccctgatg
ggcgacaaggtcgacaacatccccggcgtgcccggcgtcggcgagaagaccgccctgggc
ctgctgaccggcgtcggtggcggcctggacgtgctctacgccagcctcgacaaggtgccc
gaactggcgatccgcggcgccaagggcctgccggccaagctcgaggagcacaaggagatg
gcctacctctcctacaagctggccaccatcaagtgcgacgtcgagctgaacgtcgagatc
gaagcgctgcatcccggcgagccggacctggaagccctcgccgagctgtaccgcactctg
gaattcaagaccggcctggacgacctgcaacgccaggcgaagtccgccggcgagacgctg
ccgccgcccgtgcagccggccgaagcggtcgagacccgctatgaaaccgtgctggatcag
gcgcagttcgatgcctggctgaagaagctgcaggacgcgccgctgttcgccttcgacacc
gagaccaccagcctcgacccgcagcaggcgcagctggtcggcgtgtccttcgccgtcagc
ccgcacgaggcggcctatgtgccgctggcccactcctacatgggcgtgcccgagcagctg
gaccgcgacgccgtgctagaggccctcaagccactgctggaggacccggccaagggcaag
atcggccagcacgccaagtacgacatgaacgtcctggccaacgcctcgacgcccatcctc
atgcagggcatcgcgttcgacaccatgctcgagtcctatgtgctggattccaccgcgacc
cgccacgacatggacagcctgtcgctgaagtacctcggccacagcaccatccgtttcgag
gatatcgccggcaagggtgccaagcagctgaccttcgaccagatcgctatcgagcaggcc
ggcccctacgccgccgaggactccgacatcaccctgcgcctgcaccagaccctgtggcag
aagctcgaggccacgccgtcgctggcctccgtgttccgcgacatcgagatgccgctggtg
ccggtgctggcgcgtatcgagcgcaacggcgcctacgtcgacgccaggttgctcggccag
cagagcatcgagctgggcgcgcgcatggtggagctggagcgccaggcctacgagctggcc
ggccaggagttcaacctcggctcgcccaagcagctcggtgccatcctctacgagaagctc
ggcctgccggtgctgtccaagaccgccaccggccagccgtcgaccgccgagaacgtgctg
gcggagctggccgagcaggacttcgagctgcccaaggtgatcatgcagtaccgcaccgtg
agcaagctcaagagcacctacaccgacaagctgccggagcagatcaacccgcgcaccggg
cgcatccacacctcctatcaccaggcggtggcggcgaccgggcggctgtcctccaccgac
ccgaacctgcagaacatcccgatccgcaccgccgagggccggcgcatccgccaggccttc
gtcgcgcccaagggctacaagctgctggcggcggactactcgcagatcgagctgcgcatc
atggcccacctggccaaggacgaaggcctgctggacgccttccgtcacgaccgcgacgtg
caccgggccacggcggcggaagtcttcggcgtcgagctggagcaggtgagcaacgaccag
cgtcgcagcgccaaggcgatcaacttcggcctcatctacggcatgagcgccttcggcctg
gccaagcagatcggcgtcgaccgcaagcaatcccaggcgtacatcgaccgctacttcgcc
cgctaccccggcgtgctcgcctacatggaacgcacccgcgagcaggccgcgcagcagggc
ttcgtcgagacactgttcgggcggcgcctgtacctgcccgagatcaactcgaagaaccag
gccatgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcacggccgcc
gacatcatgaagcgcgccatggtggctgtggataactggctgagcgaatccggcctggac
gcgcgggtcatcctccaggtgcacgacgaactggtgctggaggtgcgcgaggacctggtg
gagcaggtgcgcgaggccatccgccccttgatgagcggcgcggcgcagctggatgtgccg
ctgctggtggaagtcggggtgggtgacaactgggacgaggcgcactga
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