Pseudomonas tohonis: TUM18999_01230
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Entry
TUM18999_01230 CDS
T07887
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM18999_01230 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_01230 (recB)
Enzymes [BR:
ptw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TUM18999_01230 (recB)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM18999_01230 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ETF
ResIII
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCG21932
UniProt:
A0A6J4DWP5
LinkDB
All DBs
Position
125292..128831
Genome browser
AA seq
1179 aa
AA seq
DB search
MSLDLLNDPFTGRSLIEASAGTGKTWTLTALYARLLLERRLGVGQILVVTYTTAATAELR
ERIRARLAALLAVYEGAEAPDPVLAGLHAQYPGEDAHRRLLLAVHGFDEAAIFTIHGFCQ
RALQDAAFEAGGDFDSELTADDREVLDGLLADLWRAELAAAEPAWARFLAQKRITPQSLR
QRLRSHLGKPYLRIEPRDGELGDLGAASEAWTHARDIWLRDAQACLSDLAAFDGLNKRSY
DAARFALWQGELDAYFADPAALFAAPTGLEKLGREALSKACKKGFELPGHALNAALQGLL
EALEEARPAGEARLIDLQVRLLDTLNRELPARKAAQRMLAFDDLLNRLDQSLQGPAGEAL
AAALRERYPVALIDEFQDTDPVQYAIFRRIYPGGDEGGDLCFVGDPKQAIYAFRGADLAT
YLKARDEAARQYSLNTNHRSVPALIAALNRVFDRPLPFAEPGLAYPPVGASDKARAQLVL
PEAGAPLELVWLGDEPLGKGEAGNAVAIDTARRIAALLAASGRGEAYFDEAGVRTPLRGG
DIAVLVASHRQAGDVAEQLAARGVPSVRRGRDSVWHSAEAEELAAVLAAYAEPGREGVLR
YALATRLLGRDAQALARCQDDEHAWDQEREDAERYHQFWQQQGFMRAFRAWLDEQRVAER
LIALPDGERRLTNLLHLAELLQTESLQRPGLEPLLAWFNAQRAAESHGDDALLRLESDAE
RVQIVTVHTSKGLEYPLVFCPYLWDGALLRRDEDITCHAEDGTPLLDLGGADYDDNRERA
RRERFAERLRLAYVALTRARDRLWLHWGPVALPRAKKDGELPEDGLHSSALAWLLHGREL
PGEALLGELAGHLAALDGAGLRHELQSLADASGGDIALVPCRDAEASAQGETRAAPPAAL
AHLQRGLHSAWRVGSFSGLAAGMHMEAPDRDAFFVPPATDPGAGFYGFPRGARAGTCLHA
ILEDWVRGEGELEDLVPLHLLGHGLPEDWAAIAIEQLRKVLDADLDGRGLALSRLEPSRR
LPELGFTFPVAQLDIQGLRTVLADPAHGLPEPMRLAAERLEFDTLNGFMKGFIDLTFEHQ
GRWYIADYKSNWLGPDASYYGGERLEQAIAAEHYHLQYLIYLVALRRFLRLRLDGFASEQ
LGGAYYLFLRGMPDAGVYFHRPGDALLDALDRLFEEGRP
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgacctgctcaacgatcccttcaccgggcgcagcctgatcgaggccagcgcc
ggcaccggcaagacctggaccctgaccgcgctctacgcgcgcctgctgctggagcgccgg
ctgggcgtggggcagatcctggtggtcacctacaccaccgccgccacggccgagctgcgc
gagcgcatccgcgcgcggctggcggcgctgctcgccgtctatgaaggcgcggaggcaccc
gacccggtgctcgccgggctgcatgcgcagtacccgggcgaggacgcccatcggcgcctg
ctgctggcggtgcacggcttcgacgaggcggccatcttcaccatccacggcttctgccag
cgggcgctgcaggacgcggcgttcgaggccggtggcgatttcgacagcgagttgacggcg
gacgaccgcgaggtgctcgacggcctgctcgccgacctgtggcgcgccgagctggcggcg
gcggagcccgcctgggcgcggttcctcgcgcagaagcgcatcaccccgcagtcgctgcgc
cagcgcctgcgctcgcacctgggcaagccctacctgcgcatcgaaccgcgcgacggcgag
ctgggcgacctgggtgcggccagcgaggcctggacccatgcccgcgatatctggctgcgt
gatgcacaggcctgcctgtcggacctggccgccttcgacgggctcaacaagcggagctac
gacgccgccaggttcgccctctggcagggtgagctggacgcctatttcgccgacccggcg
gcgctgttcgccgcgcccacgggcctggagaagctgggtcgcgaagccctgtccaaggcg
tgcaagaagggcttcgagctgcccgggcacgcgctcaatgccgcgctgcagggtctgctg
gaggcgctggaggaagccaggcccgccggcgaggcccggctgatcgacctgcaggtgcgc
ctgctcgacaccctcaaccgcgagctgccggcgcgcaaggcggcgcagcgcatgctggcc
ttcgacgacctgctcaaccgcctcgaccagtcgctgcaaggccctgccggcgaggcgctg
gccgccgccctgcgcgaacgctacccggtggcgctgatcgacgaattccaggacaccgac
ccggtgcagtacgccatcttccggcgcatctacccgggtggggacgagggcggcgacctg
tgcttcgtcggtgaccccaagcaggcgatctacgccttccgtggcgccgacctggccacc
tacctcaaggcccgcgacgaagccgcgcggcagtacagcctgaacaccaaccaccgctcg
gtgccggcgctgatcgccgcgctcaaccgggtcttcgaccggcccctgcccttcgccgag
ccgggcctggcctatccgcccgtgggcgccagcgacaaggcccgcgcgcagctggtgctg
cccgaggcgggggcgccgctggagctggtgtggctgggcgacgagcccctgggcaagggc
gaggccggcaacgccgtggccatcgacaccgcgcggcgcatcgccgccctgctggccgcc
agcggccggggcgaggcttatttcgacgaggccggcgtgcgcacgcccctgcgcggcggt
gacatcgccgtcctggtggccagccaccgccaggcgggcgacgtggccgagcaactggcc
gcgcgtggcgtgcccagcgtgcgtcgcggccgcgacagcgtctggcacagcgccgaggcc
gaggagctggccgcggtgctcgccgcctatgccgagcccggccgcgagggcgtgctgcgc
tatgccctggccacccgcctgctgggccgcgacgcccaggccctggcgcgctgccaggac
gacgagcacgcctgggaccaggagcgcgaagacgccgagcgctaccaccagttctggcaa
cagcaaggcttcatgcgggccttccgcgcctggctcgacgagcagcgcgtcgccgaacgg
ctgatcgccctgcccgacggcgagcgccgcctgaccaacctcctgcacctggccgaactg
ctgcagaccgagagcctccagcgcccgggcctggagccgctgctggcctggttcaacgcc
cagcgcgcggccgagagccatggcgacgacgccctgctgcgcctggaaagcgatgccgag
cgggtgcagatcgtcaccgtgcacaccagcaagggcctcgagtacccgctggtgttctgc
ccctatctctgggacggcgcgctgctgcgccgcgacgaagacattacctgccacgccgag
gacggcaccccgttgctggacctgggcggcgccgactacgacgacaaccgcgagcgcgcc
cgccgcgagcgcttcgccgagcgcctgcgcctggcctatgtggcgctgacccgcgcccgt
gatcgcctctggctgcactgggggccggtggccctgcccagggcgaagaaggacggcgag
ctgcccgaggatggcttgcacagtagcgccctcgcctggctgctgcacggccgtgaattg
cccggcgaggcgttgctcggcgaactggccggccacctcgccgcgctggatggcgccggc
ctgcgccatgagctgcagagcctggccgatgccagcggcggcgacatcgccctggtgccc
tgccgcgacgccgaggccagcgcccagggcgaaacccgcgccgcgccgccggccgccctg
gcgcacctgcagcgtggcctgcacagcgcctggcgggtcggcagcttctccggcctggcc
gccggcatgcacatggaggcgccggaccgcgatgccttcttcgtcccgccggccaccgac
ccgggcgccggcttctacggcttcccccggggcgcccgtgccggcacctgcctgcacgcg
atcctggaggactgggtgcgcggcgagggcgagctggaggacctggtgccgctgcacctg
ctgggccacggcctgccggaggactgggcggcgatcgccatcgagcagctgcgcaaggtg
ctggatgccgacctggacggccgggggctcgccctgtcgcgcctggagccgagccggcgc
ctgccggagctgggcttcaccttcccggtggcgcagctggacatccagggcctgcgcacg
gtgctggccgaccccgcccacggcctgcccgagcccatgcgcctggccgccgagcgcctg
gagttcgacaccctcaacggcttcatgaagggcttcatcgacctgaccttcgagcaccag
gggcgctggtacatcgccgactacaagtccaactggctgggcccggacgccagctactac
ggcggtgaacgcctggagcaggccatcgcggccgagcactaccacctgcagtacctgatc
tacctggtggcgctgcggcgcttcctgcgcctgcgcctggacggcttcgccagcgagcag
ctgggcggcgcctactacctgttcctgcgcggcatgccggatgccggcgtgtacttccat
cgccccggcgatgcgttgctcgatgccctggatcgcctgttcgaggagggccgcccgtga
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