Pseudomonas tohonis: TUM18999_01240
Help
Entry
TUM18999_01240 CDS
T07887
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM18999_01240 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_01240 (recD)
Enzymes [BR:
ptw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TUM18999_01240 (recD)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM18999_01240 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
Helicase_RecD
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
CbiA
AAA_28
T2SSE
Flavi_DEAD
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
BCG21933
UniProt:
A0A6J4DWK7
LinkDB
All DBs
Position
128828..130678
Genome browser
AA seq
616 aa
AA seq
DB search
MKLAEWPLGPLERFFAESLLRLDPDAGEAVTAAAALCCQALANGDVCLPLARLAGQRVFD
EGAAGLDLPALPDWLAALRASPLVASPGGYAPLTLDGERLYLSRYHAYETRLAASLLAMA
GARPPVDEARLAESLARLFARNTQQPDWQRLAAAQAVRRNLAVISGGPGTGKTTTVVRLL
AALLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAELPVDDAIKALLPEEARTLHRLLG
SRGDSPQVRHHADNPLPLDVLVVDEASMVDLALMAKLLDALPPGARLVLLGDKDQLSAVE
AGAVFAELCEGRGLDAAASADLERITGQRVPVEQPRSRLGDAVVLLTHSHRFAGDSGIGE
LARRINAGDARGTLELLREARPDLGWNPGPLQGPLLERLDAGYAPFIVAARTGDAQAAFA
AFADFRALTAQREGPWGVNGINEALEARIKRRLGIASRERWYPGRAVMVRQNDYALGLFN
GDIGICLPTPHGLRVFFEGEAGHRPFAPARLPSHDSAFAMTVHKSQGSEFREVLLALPEQ
PSPLLSRSLFYTGITRARQRVEVWGLPQRLAEAVSTRAERAAGLAARLAEAQPVVAEPAP
VPPPPAPPAGGQMDLF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcgccgaatggccgctgggcccgctggagcgtttcttcgccgaaagcctgctg
cgcctcgaccctgacgccggcgaggcggtcaccgctgccgccgcgctgtgctgccaggcc
ctggccaacggcgacgtctgcctgcccctggcgcgcctggccgggcagcgggtgttcgac
gaaggcgccgccgggctcgacctgccggccctgcccgactggctcgccgcgctgcgcgcc
tcgccgctggtggccagccccggtggctacgcgccgctgaccctggatggcgagcgcctc
tacctcagtcgctaccacgcctacgagacgcgcctggccgccagcctgctggccatggcc
ggcgcccgcccgccggtggacgaggcgcggctggccgaatccctggcccggctgttcgcc
cgcaacacccagcagcccgactggcagcgcctggccgccgcccaggcggtgcggcgcaac
ctggcggtgatctccggcggccccggcaccggcaagaccaccaccgtggtgcgcctgctc
gccgcgctgctcgaacagcccggcggcgagcgcctggccatcggcctcgccgcacccacc
ggcaaggccgccgcgcgcatggccgaggccatccgcaacgccaaggccgagctgccggtg
gacgatgccatcaaggccctgctgcccgaggaggcgcgcaccctgcaccgcctgctgggc
agccgtggcgacagcccgcaggtgcgccaccacgccgacaaccccctgccgctggacgtg
ctggtggtggacgaggcctcgatggtggacctggcgctgatggccaagctgctcgacgcc
ctgccgccgggcgcccgcctggtgctgctgggcgacaaggaccagctctcggcggtggaa
gccggcgcggtgttcgccgagctctgcgaggggcgtggcctggacgccgccgccagtgcc
gacctggagcgcatcaccggccagcgcgtgcccgtggagcagccgcgctcgcgcctgggc
gacgccgtggtgctgctgacccacagccaccgcttcgccggcgacagcggcatcggcgag
ctggcgcggcgcatcaatgcgggtgacgcgcggggcaccctggaactgctgcgcgaggcg
cgtcccgatctcggctggaaccccggcccgctgcaaggcccgctgctggagcgcctggac
gccggctacgcgcccttcatcgtcgccgcgcgcacgggtgatgcgcaggctgccttcgcc
gccttcgccgacttccgcgccctcaccgcccagcgcgaggggccctggggcgtcaatggc
atcaacgaggcgctggaggcgcggatcaagcggcgcctgggcatcgccagccgcgagcgc
tggtatccggggcgcgcggtgatggtgcggcagaacgactacgccctggggctgttcaat
ggcgatatcggcatctgcctgcccacgccccacggcctgagggtgttcttcgagggcgag
gctggccatcgccccttcgccccggcgcggttgcccagccacgacagcgccttcgccatg
acggtgcacaagagccaggggtcggagttccgcgaggtgctgctggcgctgccggagcag
ccgagcccgttgctcagccgctcgctgttctacaccggcatcacccgcgccaggcagcgc
gtggaggtctggggcctgccgcagcgcctggccgaggcggtgagcacccgcgccgagcgc
gccgccgggttggccgcgcgcctggccgaggcccagccggtggtggccgaaccggccccc
gtcccgcccccgcccgcgccgcctgcgggcgggcagatggacctgttctag
DBGET
integrated database retrieval system
