Pseudomonas tohonis: TUM18999_02940
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Entry
TUM18999_02940 CDS
T07887
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03420
Nucleotide excision repair
ptw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM18999_02940
03430 Mismatch repair
TUM18999_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_02940
Enzymes [BR:
ptw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM18999_02940
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM18999_02940
MMR (mismatch excision repair)
Other MMR factors
TUM18999_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
AAA_30
PcrA_UvrD_tudor
AAA_22
DUF1687
Motif
Other DBs
NCBI-ProteinID:
BCG22103
UniProt:
A0A6J4DX31
LinkDB
All DBs
Position
complement(310056..312080)
Genome browser
AA seq
674 aa
AA seq
DB search
MGNKIVNLLVQHGLLPEARIESKDHLRTKIAREAFTHVFKAINGSNVAPDKEQVDGFISF
LMLVKSSTNRPEEVFERYSYGSIAKGYPEAFHLFESRRAQLKIRFFEDQLYDPVKLMLRR
PLAQRYVQNRVDHLIVDEAQDMNGIQIELLKILAGDRAQVMLVGDEDQAIYDWRGAEPDY
LIRGFEQDFPHATRYTLPHTFRFGHALSIAASQLITHNKNRNPKISISNEKAPLTRIHCL
PLTLGLADLGEHVAQQLTAGVALQDIAVLVRTYDLSVTLELDLHQRGIPYHVYGRPPLMR
IPEISALLGVLQLASGRWRSLEGDQLRYVIKSLLYRPTLYLDKAALNRVIELVVHHPERL
VEAIRSTITPQTKDFQANQIRDRADLLEILATSTAPHEKVITVLDRYLLATEFERNIEKQ
SPTLDQATAVMANVQAFRTIASRHEGTIDEFLDSLDPLIDSSAVEPPTTAHVWISSIHRA
KGAQWSRVFVPGLVRGGFPRDRLSNEEIEAERRLFYVAITRAVDEVFIAHPSDPEFQRIL
ETATPTDPDPAISSVSCFLWEMDIALARHAGAAIEEKRFEAPGEIERPQIANAYFATFPF
SQDWHYVQRPQASIAANTHQGILGAEAGTKVIHAVFGTGTIEKWIDDRVLRVIFDDGDTR
LLVASMAPMETALM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaaaatcgtaaatctactcgtccagcacgggttgcttccagaggcgaggata
gaatccaaggatcacctacggacaaagattgccagagaggcgttcactcatgtgttcaaa
gctatcaacggaagcaacgttgccccagacaaggagcaggtagacggttttatctccttc
ctgatgctggtcaagtcgagcacgaacaggcctgaggaggtattcgagagatacagttat
ggctcgatcgccaaagggtatcccgaagcgttccatctttttgaaagtcgccgtgcacaa
ctgaaaatcagattctttgaagatcaactctatgacccagtcaagctgatgctgaggcgg
cctctagcgcaacgctatgtccagaaccgagttgaccatctgatagtggatgaggctcag
gacatgaatggtattcagatcgaactactgaagattctcgccggcgatagagctcaagta
atgctggtcggagacgaagatcaagctatctacgattggcgcggcgcggaaccggactat
ctcatccgcggcttcgaacaggacttcccgcatgccacccgatataccctgccccacaca
ttccgcttcggtcacgcactttcaatcgcggccagccagctgatcacccacaataaaaac
cgtaaccccaagatcagtatctccaatgagaaagctccgcttacacgcatccattgcttg
ccacttaccctgggtttagctgacctcggcgagcacgtagcacaacaactcaccgctggg
gtcgcgctccaagatattgcagtgctggtcagaacctatgatctcagcgtcaccctagaa
ctggacttgcatcagcgagggattccttaccacgtatatggccgaccacctctgatgcga
attccagaaatcagtgcactgctcggtgttcttcaactggccagcggtcgctggagatcc
ctagaaggtgatcaattgcgatacgtcatcaagagcttgctgtaccgacctactctctat
ctggacaaggcagcattaaatcgcgttatagagttagtagtgcatcatcccgagcgactt
gtggaggctatccgctctaccatcaccccgcagaccaaagatttccaagcgaaccaaatt
cgtgatcgtgctgacttacttgagattctcgcaacctctacggccccccacgaaaaagtt
attacagtgcttgatcgctacctgctggcaacggagttcgaacgaaacattgaaaaacag
tcgcctaccctagaccaagcaacagctgtcatggcaaacgttcaggcatttcgaaccata
gccagccggcatgagggcaccatcgacgagttcctggacagccttgaccctctcattgac
tcatctgcggtggagccacccactactgcacacgtatggatcagctctatccatcgtgct
aaaggagcccaatggtcccgagtctttgtacctgggttggtgagaggcggttttcctcgc
gaccgtcttagcaacgaagagattgaggcagagcgtcggcttttctatgtagctatcact
cgtgccgttgatgaggtgttcattgctcaccccagtgacccagagtttcagcgcatcctt
gagactgctaccccaaccgatcctgaccctgcaatcagctcagtctcctgctttctctgg
gagatggatatcgccctagcccgacacgctggagcggcgatcgaagaaaaacgctttgaa
gcccctggagaaatagagcgcccacagattgcaaacgcttacttcgcaacattccccttc
tcacaggattggcactatgtacagcgcccccaggcctcaatagccgcaaatacacatcaa
ggcattctgggagcagaagctgggactaaggtcattcatgcagtgttcggtacggggact
atcgaaaagtggattgatgatcgagtcctgagggtaatctttgatgacggagatactcga
ctactagtagccagcatggcaccgatggagaccgcactgatgtaa
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