Pseudomonas tohonis: TUM18999_03120
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Entry
TUM18999_03120 CDS
T07887
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03420
Nucleotide excision repair
ptw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM18999_03120
03430 Mismatch repair
TUM18999_03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_03120
Enzymes [BR:
ptw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM18999_03120
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM18999_03120
MMR (mismatch excision repair)
Other MMR factors
TUM18999_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
Herpes_ori_bp
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BCG22121
UniProt:
A0A6J4E0L7
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All DBs
Position
complement(330597..332324)
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AA seq
575 aa
AA seq
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MSRRIDSPDTDADREIHACIAATPPQPFVVRAGAGSGKTTSLIKALDWVMSEHGASMRAR
KQKVACITYTDLAANEILADVNDDPLVHVSTIHSFYWSIAKTFQADIKVWLQNDIRRRIS
DLKEEFENYSSRVRQTTRDRNKADQERYARSLEAVAGVRTFNYGMGSDYAKGILGHEDIL
QLADFLLQNRPLFRRVVALSYPFVFIDESQDTFPGVVKSFKEVEAQMQGKFCLGFFGDPM
QSIFMRGAGDIQLEDHWRAITKPENFRCAKQILDVANAVRAQGDGMEQVRGLHERVDGGL
KLVEGSARMFVLPNTLNRTEALARVRAWSSATNNDDGWTTPDIAVKILVIVHRMAANRLG
FGGIYSALNDKTSDAMKQGMQDGTGWPVRPFLSFALPIIAAVKAGNEFAAINLLREFSPR
LAPAALTRQRAVDVLRELHAAVSRLVAMLDEAGTTIGDIALHLCDTGLFKFDERYARVLG
FFRDVADAVQESEAADAVPAEGLSSDAAMAKFLNCSAQELLPYERYVSEGSPYATQHGVK
GAQFERVIVVMDEEESDYRMYDYVNRPGFCGGRFV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgaattgatagcccagataccgacgccgaccgcgagatccacgcatgcatt
gccgcgacgcctccgcagcccttcgtggttcgtgctggggcaggttccggcaagaccacc
tccctcatcaaggcgctggactgggtgatgtcggagcacggcgccagcatgcgggcgagg
aagcagaaggtcgcgtgcatcacgtataccgaccttgccgccaatgaaatcctggcggac
gtcaacgatgacccgctggttcatgtctcgaccatccacagcttttactggtctattgcc
aagacgtttcaggccgacatcaaggtttggctgcagaacgacatccgcaggcggatttcc
gatcttaaagaagagtttgagaattacagctcgcgtgtccggcagaccacgcgagacagg
aacaaggccgaccaagagcgctatgcccgaagcctagaggctgtggccggcgtcaggacg
ttcaactacggcatgggcagtgactacgccaagggcatactcggccacgaggacatcctt
cagctcgccgacttcctgctacaaaaccgcccgctgtttcgacgggtcgtggcgctgagc
tacccgttcgtgtttatcgacgagagtcaggacacgttcccgggcgtggtgaagtctttc
aaggaagtggaagcccagatgcagggcaagttctgccttggttttttcggcgacccgatg
cagtcgatcttcatgagaggcgcaggggacatccagcttgaggaccattggagggccatc
acgaagccggagaactttcgctgcgccaagcagatccttgacgtcgccaatgccgtgcgc
gcgcagggcgacggtatggagcaagtccgcgggctgcacgagagggtcgatgggggcctc
aagctggtggaggggtcggcccggatgttcgtcttgccgaacacgctgaaccgaaccgag
gccttggcaagagtccgggcgtggagctcggcgacgaacaacgacgatggttggacaacc
ccagacatcgcagtcaagattcttgtcatcgtgcaccgcatggcggcaaaccggctcggc
ttcggcggcatctactcggcgctgaacgacaagacgtcggatgccatgaagcaggggatg
caggacggcaccggctggcccgttcgacccttcctaagttttgcgctaccgatcattgca
gctgtgaaggccggcaatgagttcgcggctataaacctgctccgggagttcagcccgcgc
ctggcgcctgcggctctgacccgccaacgtgccgtggatgtattgcgagagctgcatgct
gctgtatcgagacttgtggccatgctggatgaggcagggaccaccattggtgacatagct
ctccatctctgtgacacgggtcttttcaagttcgatgagcgctatgcgcgtgttcttggg
tttttcagagatgttgctgacgccgttcaggagtccgaggctgctgatgcagttccggct
gaaggattatcctcggacgcggcaatggccaagttcctcaattgctctgcgcaagagctt
ttgccctatgaacgctatgtctcagaaggctccccctatgccacgcagcacggcgtgaag
ggagcgcagttcgaacgcgtcatagtggtgatggacgaagaagaaagcgactaccgaatg
tacgactacgtgaatcgccccggcttttgtggaggccgtttcgtttaa
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