Pseudomonas tohonis: TUM18999_04790
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Entry
TUM18999_04790 CDS
T07887
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM18999_04790 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptw03019
]
TUM18999_04790 (rppH)
Messenger RNA biogenesis [BR:
ptw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TUM18999_04790 (rppH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
BCG22288
UniProt:
A0A6J4DYN0
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All DBs
Position
509050..509529
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILANDAGQVLWARRINQDAWQFPQGGINPRETPEEALFRELNEEVGL
EERDVKILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLQSDENRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLAQD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcccgatggtttccgccccaatgtcggcatcattctcgccaatgatgccggg
caggtgctttgggctcggcgtatcaaccaggatgcctggcagttcccccagggaggcatc
aacccccgcgagacgccggaagaggcgctgttccgcgagctgaacgaggaagtcggtctc
gaggagcgggatgtgaaaatacttgcatgcacccggggctggttgcgctatcgtctgccg
cagcgtctggtgcggacccacagccaacccctgtgcatcgggcagaaacagaaatggttc
ctgctgcgcctgcagtcggatgagaaccgggtacgcatggacctgaccggcaagcccgag
ttcgatggctggcgttgggtcagctactggtatccgctggggcaggtcgtgaccttcaag
cgagaagtctaccgccgtgccctcaaggaattagccccgcgcctgctggcgcaagactga
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