Pseudomonas tohonis: TUM18999_05160
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Entry
TUM18999_05160 CDS
T07887
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptw03021
]
TUM18999_05160 (rpoH)
Transcription machinery [BR:
ptw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUM18999_05160 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
GntR
Motif
Other DBs
NCBI-ProteinID:
BCG22325
UniProt:
A0A6J4DZ03
LinkDB
All DBs
Position
549615..550469
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AA seq
284 aa
AA seq
DB search
MTTSLQPVYALAPGANLDAYVHAVNGIPLLTPDQERELAERLFYQQDLEAARQMVLAHLR
FVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHAVAESLGVEPHEVREMESRLTGHD
MAFDPAADADDDTAYQSPAHYLEDHRYDPARQLEEADWSDSSTASLHEALEGLDERSRDI
LNQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGFIQA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttccctgcaacctgtctatgccctggctcccggtgcgaacctggatgcctac
gtgcatgcggtcaacggcatcccgctgctgacccccgatcaggagcgcgaactggccgaa
cgcctcttctaccaacaggatctggaagcggcgcggcaaatggtgttggcgcacctgcgc
ttcgttgtacacatcgccaagagctactccggctatggtctggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaggccgtgaaacgcttcaacccggaaatgggcgtg
cgtctggtgtccttcgcggtgcactggatcaaggccgagatccacgagttcatcctgcgc
aactggcgcatcgtcaaggtcgccaccaccaaggcgcagcgcaaactgttcttcaacctg
cgcagccagaagaaacgcctggcctggctgaacaacgacgaagtccacgccgtggccgag
agcctgggcgtggagccgcatgaagtgcgggagatggaaagccggctgaccggccacgac
atggcgttcgacccggcggcggatgccgacgacgacaccgcctaccagtcgccggcccac
tacctggaagaccaccgctacgacccggcccgccaactggaggaagcggactggagcgac
agctccaccgccagcctgcacgaagcgctggaaggcctggacgagcgcagccgtgacatc
ctcaaccagcgttggttggccgaggagaaagcgaccctgcatgacctggccgcgaagtac
aacgtctccgccgagcgtatccgtcagctggagaagaatgcgatgaacaagctcaagggc
ttcatccaggcgtaa
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