Pseudomonas tohonis: TUM18999_07700
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Entry
TUM18999_07700 CDS
T07887
Symbol
vfr
Name
(GenBank) cyclic AMP receptor-like protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ptw
Pseudomonas tohonis
Pathway
ptw02020
Two-component system
ptw02024
Quorum sensing
ptw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM18999_07700 (vfr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM18999_07700 (vfr)
02025 Biofilm formation - Pseudomonas aeruginosa
TUM18999_07700 (vfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptw03000
]
TUM18999_07700 (vfr)
Transcription factors [BR:
ptw03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
TUM18999_07700 (vfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HVO_A0261_N
MarR_2
HTH_28
HTH_11
MltA
bAvd
GntR
RPA_C
HTH_24
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
BCG22579
UniProt:
A0A6J4DZQ6
LinkDB
All DBs
Position
complement(842981..843664)
Genome browser
AA seq
227 aa
AA seq
DB search
MDKGLPSKFRDSGMVAITLTPKIKNLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKG
SVTILIEDDDGREMIIAYLNSGDFFGEMGLFEKEGTEKERSAWVRAKTECEVAELSYAKF
RELTQQDPEILYALGSQMADRLRNTTRKVGDLAFLDVTGRVARTLLDLCKQPDAMTHPDG
MQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttggacaaaggcttaccttcaaaatttcgggactcgggcatggtagctattaccctcaca
cctaaaatcaagaacctcgacaagctgctagcgcactgtcaccgccgtcgttacacggca
aagagcaccatcatctacgcgggtgaccgctgcgagacgctcttcttcatcatcaagggc
tcggtcaccatcctcatcgaggatgacgacggccgggaaatgatcatcgcctatctcaac
tccggggacttcttcggcgagatggggttgttcgaaaaggaaggaaccgagaaggaacgc
agcgcctgggtacgggccaagacggaatgcgaagtcgctgaactcagctacgccaagttc
cgtgaactgacccagcaggacccggagatcctctacgccctgggcagccagatggcggat
cgcctgcgcaacaccacgcgcaaggtcggcgacctggcattcctcgacgtcaccggccgt
gtcgctcgtaccctgctggacctctgcaagcagcccgacgccatgactcacccggacggc
atgcagatcaagatcacccgccaggaaatcggtcgcatcgtcggctgctcgcgggagatg
gtcggacgcgtactcaagagcctggaggaacagggcctggtacacgtcaagggcaagacc
atggtggtattcggtacccgctga
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integrated database retrieval system
