Pseudomonas tohonis: TUM18999_08300
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Entry
TUM18999_08300 CDS
T07887
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TUM18999_08300 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptw03021
]
TUM18999_08300 (rpoA)
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_08300 (rpoA)
Enzymes [BR:
ptw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TUM18999_08300 (rpoA)
Transcription machinery [BR:
ptw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TUM18999_08300 (rpoA)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TUM18999_08300 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
BCG22639
LinkDB
All DBs
Position
898356..899357
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAVKLHGRDEVTLNLVKKGSGVVTAADIQLDHD
VEIVNGDHVIANLAENGALNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDSSFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccacattgatgtgcaggtggtcagt
ccgacccgcgccaagatcacgctcgagcctctcgagcgcggtttcggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgaa
atcgatggcgtactccacgagtacagcgccatcgaaggtgttcaggaagatgtcatcgaa
atcctgctcaacctgaaaggtctggctgtcaagctgcacggtcgtgacgaagtaacgctg
aacctggtcaagaaaggttcgggcgtggtcactgctgccgatattcagctggatcatgat
gtcgagatcgtcaatggcgaccacgtgatcgctaacctggcggaaaacggtgcactgaac
atgaagctcaaggtggctcgtggtcgcggctatgagccggctgacgcgcgccagagcgat
gaagacgagagccgcagcatcggtcgcttgcagctcgactcctcgttcagcccggtccgt
cgcgttgcctacgtcgtggaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gttattgacctggaaaccaacggtaccctggaccccgaagaggccatccgtcgtgccgct
accatcctgcaacagcagttggcagcgttcgtcgacctcaaaggtgacagcgagcccgta
gtagtcgagcaggaagacgagatcgatccgatcctgctgcgcccggttgatgatcttgag
ctgaccgtacgttcggccaactgcctgaaggcggagaacatttactacatcggtgatctg
atccagcgcaccgaagtggaactgttgaagactccgaacctgggcaagaagtccctgacc
gagatcaaggacgtcctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgccggcaagtcttaagaaggacgacaaggcgactgcctga
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