Pseudomonas tohonis: TUM18999_15140
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Entry
TUM18999_15140 CDS
T07887
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptw03021
]
TUM18999_15140 (rapA)
Transcription machinery [BR:
ptw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TUM18999_15140 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCG23323
UniProt:
A0A6J4E087
LinkDB
All DBs
Position
complement(1640575..1643424)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILASDGRLLTVLYPATGETRQYALRNAPLTRVRFAPG
DEITHFDGWKLTVQEVDDIDGLLIYHGLTAQHEERTLPETQLSNFIQFRLASDRLFAGQI
DPMNWFGLRYHTLEHQSRLLQSPLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDGERFLESDA
SNPFEDAQLALVSLEWLKDSEKAQDAAFAAGWDLLVVDEAHHLVWHPEQASDEYRLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPARFHDLEAFRAESANYKPIAEAVQELLDQ
GRLSPGAHATISGFLGAEGEALLAAVSDCDSEAAARLVRELLDRHGTGRLLFRNTRAAVQ
GFPERNLHPYPLPSPVEYMELPVGEHPDLYPEVSFQAQQESGDEAERWWRFDPRVEWLID
TLKMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIQLHVPYLETS
PQERLFQWYNQALNAFLATCPTGNALQHQFGPRLLPLLDGGDDGEWQALVDEAEAERKRL
EGELHAGRDRLLELNSGGAGEGQALVEAIHEQDDQFALPIYMEALFDAFGIDSEDHSENA
LVLKPGEKMLDAGFPLGDDEGVTITYDRNQALSREDMQFLTWEHPMVQGGMDLVLSGSMG
NTSVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLASKVA
FDTLNDQLESVPRGSANKFVQAQRDVLSAQIHAAEAKIRPRHEARVADAVKRLSAELDEE
LARMTALKAVNPSVRDSEIEALRKQRDDGLALMEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtaccaaccggggcaacgctggatcagtgacagcgaagcggaactgggg
ctcgggaccatcctggcatcggatggacgcctgctcacagtgctctacccggccacgggc
gaaacccgccagtacgccctgcgcaatgcgcccctgacccgcgtccgcttcgccccgggt
gacgagatcacccacttcgacggctggaagctcaccgtccaggaagtcgacgacatcgac
ggcctgctgatctaccacggcctcacggcgcagcacgaagaacggaccctgccggagacc
cagctctccaacttcatccagttccgcctcgccagcgatcgcctgttcgccggccagatc
gacccgatgaactggttcggcctgcgctaccacaccctggagcaccagagccgcctgctg
caatccccgctctggggcctcggcggcgcccgcgcgcaacccatcgcccaccagctgcac
atcgcccgtgaagtggccgaccgcatcgccccgcgcgtcctgctggccgacgaagtgggc
ctcggcaagaccatcgaagcgggcctggtgatccaccgccagctgctgtccggccgcgcc
aaccgcgtgctgatcctggtaccggagaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgacggcgagcgcttcctcgagagcgacgcc
agcaaccccttcgaggacgcgcagctggcgctggtctccctggaatggctgaaggacagc
gagaaggcccaggacgccgccttcgccgccggctgggacctgctggtggtcgacgaagcc
caccacctggtctggcacccggagcaggccagcgacgaataccgcctggtcgagcaactg
gccgaggtcatccccggcgtgctgctgctcaccgccaccccggaacagctgggccaggac
agccacttcgcccgcctgcgcctgctcgacccggcgcgcttccatgacctggaagccttc
cgcgccgaaagcgccaactacaagcccatcgccgaggccgtgcaggagctgctggaccag
ggccgcctgtcacccggtgcgcacgccaccatctccggcttcctcggcgccgaaggcgaa
gccctgctggccgccgtctccgattgcgacagcgaggccgccgcccgcctggtgcgcgag
ctgctggaccgccacggcaccggtcgcctgctgttccgcaacacccgcgccgccgtgcag
ggcttccccgagcgcaacctgcacccctacccgctgccgagccccgtggaatacatggag
ctgccggtgggtgaacaccccgacctgtacccggaagtcagcttccaggcgcagcaggaa
agcggtgacgaggccgagcgctggtggcgcttcgacccgcgcgtcgaatggctgatcgac
accctgaagatgctcaagaagttcaaggtgctggtgatctgtgcccacgccgagaccgcc
ctggacttggaagacgccctgcgcgtgcgttccggcatccccgccaccgtgttccacgaa
ggcatgagcatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaggaattcggc
gcccaggtgctgatctgttccgagatcggcagcgaaggccgcaacttccagttcgcccat
cacctggtgctgttcgacctgccggcccacccggacctgctggagcaacgcatcggccgc
ctcgaccgcatcggccagaagcacaccatccagctgcacgtgccctacctggagaccagc
ccgcaggagcgcctgttccagtggtacaaccaggcactcaacgccttcctcgccacctgc
cccaccggcaacgccctgcagcaccagttcggcccgcgcctgctgccgctgctggacggc
ggtgacgacggcgagtggcaggccctggtggacgaggccgaagccgagcgcaagcgcctg
gaaggcgagctgcatgcgggccgcgaccgcctgctggagctcaactccggcggtgccggc
gaaggccaggcgctggtggaggcgatccacgagcaggacgaccagttcgccctgcccatc
tatatggaggccctgttcgacgccttcggcatcgacagcgaggaccactccgagaacgcc
ctggtgctcaagccgggcgagaagatgctcgacgccggcttccccctgggcgacgacgaa
ggcgtgaccatcacctacgaccgcaaccaggcgctgtcccgcgaggacatgcagttcctc
acctgggaacaccccatggtgcagggcggcatggacctggtgctctccggctccatgggc
aacacctcggtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctcgag
ctgctctacgtcagcgaagtggtggcgccgcgtgcattgcagctgggccgctacctgccg
ccggcggcgctgcgctgcctgctcgacgccaacggcaacgacctggccagcaaggtggcg
ttcgacaccctcaacgaccagctggaaagcgtgccgcgcggcagcgccaacaagttcgtc
caggcccagcgcgacgtgctctcggcacagatccacgccgccgaagcgaagatccgcccg
cgtcacgaagcccgtgtggccgatgccgtgaagcgcctgagcgccgagctggacgaggaa
ctggcgcgcatgaccgccctcaaggccgtcaacccgagcgttcgcgacagcgagatcgaa
gccctgcgcaagcagcgtgacgacggcctggcgctgatggaaaaagccgccctgcgcctg
gaggcgatccgcgtgctggtggcgggttga
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integrated database retrieval system
