Pseudomonas tohonis: TUM18999_16850
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Entry
TUM18999_16850 CDS
T07887
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM18999_16850 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_16850 (uvrB)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM18999_16850 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TUM18999_16850 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
Cauli_AT
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BCG23494
UniProt:
A0A6J4E3D4
LinkDB
All DBs
Position
1827537..1829552
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQLVEGLEAGLSHQTLLGVTGSGKTFSIANVISQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNSVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIEQ
MRLSATKALLERSDAIIVATVSSIYGLGDPQSYLRMVLHLDRGDKIDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPREVILGAVEKIKEELKERLDYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGREPGQAPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKENL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPE
IEVRPATTQVDDLLSEIRKRVAVEQRVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDT
VERVEIIRDLRIGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNVTGSMQRAIDETERRRNKQIAFNEANGIVPKGVQKDVQDILEGATV
PGSRSNKRKAMAKAAEENARYEAELRSPSEITKRIRQMEEKMYQLARDLEFEAAAQLRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttcaacttgtcacccgcttccagccggccggcgaccaacctgaggccatc
cgtcagttggtcgagggcctggaagccggtctgtcgcaccagacgctgctgggggtgacc
ggttcgggcaagaccttcagcatcgccaatgtcatctcccaggtgcagcgtccgacgctc
gtgctggcgccgaacaagacgctggccgcccagctctatggcgagttcaaggccttcttc
ccgaacaattccgtcgagtatttcgtctcctactacgactattaccagcccgaagcctac
gtaccgtcctcggacacctatatcgagaaggacgcatcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggccctgctggagcgctccgacgcgatcatcgtcgccacg
gtttcctcgatctacggcctgggcgacccccagtcatacctgcgcatggttctgcacctg
gaccggggcgacaagatcgaccaacgcgcgctgctgcgccgcttggccgacctgcagtac
acccgcaacgacatggacttcgcccgcgccaccttccgtgtcaggggcgatgtgatcgat
atcttcccggcagagtccgatctggaggcgatccgcgtcgagttgttcgacgacgaggtg
gagagtctttccgccttcgatcccctgaccggcgaggtgatccgcaagctgccacgcttc
accttctaccccaagagccactacgtgacgccgcgtgaggtgatcctcggtgcggtggag
aagatcaaggaagagctcaaggagcgcctcgactacctgcgtagcaacaacaagctcgtg
gaggcccagcgcctggagcagcgcacccggttcgacctggagatgatcctcgaactgggc
tattgcaacggcatcgagaactactcccgctatctttccggtcgtgagcccggccaggcg
ccccccaccctctacgactacctgccggcgaactcgctgttggtgatcgacgaatcgcac
gtcagcgttccgcaggtcggggcgatgttcaagggtgaccgttcgcgcaaggaaaacctg
gtggagtacggcttccgcctgccgtcggcgctggacaaccgacccatgcgcttcgacgaa
tgggaggcggtcagcccgcagaccatcttcgtttccgcgacgcctgggccctacgaggcc
gagcatgccgggcgcgtcgtcgagcaggtggtgcgtccgaccggcctggtggacccggag
atcgaggtgcgtccggccacgacgcaagtcgacgacctgctgtcggagatccgcaagcgt
gtcgccgtcgaacagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgactacctgtccgaccatgacgttcgggtgcgctacctgcattcggatatcgacacg
gtggagcgggtggagatcatccgtgacctgcgcatcggcgctttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggatatgccggaggtttcgctggtggccatcctcgac
gccgacaaggagggcttcctgcgttccgagcgctcgctgatccagaccatcggtcgggcc
gcgcgcaacctgcatggcaaggccatcctctacgccgacaacgtcaccggctcgatgcag
cgcgccatcgacgagaccgagcgtcgccgcaacaagcagatcgccttcaacgaagccaac
ggcatcgttcccaagggcgtgcagaaggacgtccaggacatcctcgaaggtgccaccgtg
ccgggctcacgcagcaacaagcgtaaggcgatggccaaggcggcggaggaaaacgcccgc
tacgaggcggagctgcgctcgccgagcgagatcaccaagcgcatccgccagatggaagag
aagatgtaccagttggcccgcgacctggagttcgaggccgccgcgcagctgcgtgacgag
atccagaagctccgtgacaggctgctgcaggtgtga
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integrated database retrieval system
