Pseudomonas tohonis: TUM18999_20100
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Entry
TUM18999_20100 CDS
T07887
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptw03000
]
TUM18999_20100
Transcription factors [BR:
ptw03000
]
Prokaryotic type
Helix-turn-helix
Other families
TUM18999_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
HTH_7
AAA_3
AAA
nSTAND6
HTH_23
HTH_20
HTH_17
HTH_24
AAA_7
HTH_AsnC-type
nSTAND3
AAA_30
HTH_Tnp_1
PAS_7
HTH_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCG23819
UniProt:
A0A6J4E390
LinkDB
All DBs
Position
complement(2195755..2197626)
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AA seq
623 aa
AA seq
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MATPAQAPTPAPNHDAIVRDSWNRCRDFGLTHQSRPSFGEAAAGDVSALLESQHFLVQTT
HQEVLPYYENILANSNCLIMLADSRGQLLQSWGDRRFVEPSQAAGFVAGALWQERTTGTN
AIGTALACGQAVHIQRDEHFLKANRFMTGSASPIFDATRQMIGVLDVSSDSYLPPSHTLG
MVKMMSQSVENRLILGRFKDDYFQLSFNTSLDNLDSQWAGLLVFDEAGQVVSANRRADSL
LGIGLSWMNIESLFDLSLPQLLAQPDNLPFPLRAAGRYRFHGRLLRPRKPRIEPRDFRPA
PAAPSEAPRGELTLGTLSLGDARVDRVVQQARRLLEKDIPILIQGETGVGKEVFVKALHQ
ASSRAGKPLVAVNCAAIPAELVESELFGYEKGAFTGASQKGSVGLIRKAHQGTLFLDEIG
DMPLNVQARLLRVLQERSVQPLGGGEPYPVDIRLVSATNRPLRQDVDAGLFRRDLYYRVS
GLNLELPPLRERSDRGELFRRLWEQHREPRQWAGFSSDVLELFMAHPWPGNLRQAGSVIQ
IALAMAEEHPIRREHLPDDFFADLPDAPPPTPGATPAQTTDESLAAQLQACGGNISDLAR
RLNLSRNTLYKRLREQGLYRGGD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctgcccaggcgcccaccccggcgccgaaccacgatgcgatcgtccgcgac
tcgtggaaccgctgccgcgacttcggccttacccaccagagccggccgagcttcggcgaa
gccgctgcgggcgacgtctcggcgttgctggaaagccagcacttcctggtgcagaccacc
caccaggaggtcctgccctactacgagaacatcctcgccaactccaactgcctgatcatg
ctcgccgacagccggggccagttgttgcaatcctggggcgaccgccgcttcgtcgagccg
tcccaggccgccggtttcgtcgccggcgccctctggcaggaacgcaccaccggcaccaac
gccatcggcaccgcgctggcctgcggccaggccgtgcacatccagcgcgacgagcacttc
ctcaaggccaaccgcttcatgaccggttccgcctcgccgatcttcgacgccacgcggcag
atgatcggcgtgctcgacgtctccagcgacagctacctgccgccctcgcacaccctgggc
atggtcaagatgatgagccagtcggtggagaaccggctgatcctggggcgcttcaaggac
gactacttccagctcagcttcaacaccagcctggacaacctcgacagccagtgggccggg
ctgctggtgttcgacgaggccggccaggtggtctcggccaaccgccgcgccgactcgctg
ctgggcatcggcctgtcgtggatgaacatcgaaagcctcttcgacctcagcctgccgcag
ttgctggcgcaaccggacaacctgcccttcccgctgcgcgctgccggccgctaccgcttc
catggccgcctgctgcgtccgcgcaagccgcgcatcgaaccccgcgacttccgccccgct
ccggccgcgccgagcgaagcgccacgtggcgaactgaccctcggcaccctcagcctcggc
gacgcccgcgtcgaccgcgtggtgcaacaggcacggcggctgctggaaaaggacattccc
atcctcatccagggcgaaacgggcgtcggcaaggaggtgttcgtcaaggccctgcaccag
gccagctcccgcgccggcaagccactggtggcggtgaactgcgcggccatcccggccgaa
ctggtggagtcggagctgttcggttacgaaaagggggccttcaccggggccagccagaag
ggcagcgtcggcctgatccgcaaggcgcaccagggcaccctgttcctcgacgagatcggc
gacatgcccctcaacgtccaggcccgcctgctgcgggtgctgcaggaacgcagcgtgcag
ccgctcggtggcggcgagccctacccggtggacatccgcctggtatcggccaccaaccgc
ccgctgcgccaggacgtggacgccgggctgttccgccgggacctctactaccgcgtcagc
ggactcaacctcgaactgccgcccctgcgcgaacgcagcgaccgtggcgaactgttccgc
cgcctctgggaacagcaccgcgagccgcgccagtgggccggcttcagcagcgacgtgctg
gaactgttcatggcccacccctggcccggcaacctgcgccaggccggcagcgtgatccag
atcgccctggccatggccgaggaacaccccatccgccgcgagcacctgccggatgacttc
ttcgccgatctgccagacgccccaccacccacccccggcgctacgccagcgcaaacaacg
gacgaaagcctcgccgcccagctacaggcctgcggcggcaacatctccgacctcgcccgg
cgcctcaacctcagccgcaacaccctgtacaagcgcctgcgggaacagggcctgtatcgc
ggtggcgattaa
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