Pseudomonas tohonis: TUM18999_20260
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Entry
TUM18999_20260 CDS
T07887
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptw03032
]
TUM18999_20260 (hupB)
03036 Chromosome and associated proteins [BR:
ptw03036
]
TUM18999_20260 (hupB)
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_20260 (hupB)
DNA replication proteins [BR:
ptw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TUM18999_20260 (hupB)
Chromosome and associated proteins [BR:
ptw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TUM18999_20260 (hupB)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TUM18999_20260 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BCG23835
UniProt:
A0A6J4E3A1
LinkDB
All DBs
Position
2215941..2216213
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AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTG
RNPQTGKPIKIAAAKIPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgatcgatgccatcgccgcatctgctgatatcccgaaagctgtc
gctggccgtgcgctggacgcagttatcgaatccgtcactggcgctctgaaggctggtgat
tccgtggtgctggtaggtttcggtactttcgctgtgaaagagcgcgctgctcgcactggc
cgtaacccgcagactggcaagccgatcaagatcgctgctgccaagatccctggcttcaaa
gctggtaaagctctgaaagacgccgtcaactaa
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