Pseudomonas tohonis: TUM18999_22430
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Entry
TUM18999_22430 CDS
T07887
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00020
Citrate cycle (TCA cycle)
ptw00190
Oxidative phosphorylation
ptw00650
Butanoate metabolism
ptw00720
Other carbon fixation pathways
ptw01100
Metabolic pathways
ptw01110
Biosynthesis of secondary metabolites
ptw01120
Microbial metabolism in diverse environments
ptw01200
Carbon metabolism
Module
ptw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptw_M00149
Succinate dehydrogenase, prokaryotes
ptw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TUM18999_22430 (sdhA)
00650 Butanoate metabolism
TUM18999_22430 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
TUM18999_22430 (sdhA)
00720 Other carbon fixation pathways
TUM18999_22430 (sdhA)
Enzymes [BR:
ptw01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
TUM18999_22430 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_binding_3
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BCG24052
UniProt:
A0A6J4E2T0
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All DBs
Position
2466707..2468479
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AA seq
590 aa
AA seq
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MSSIRTLSYDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAV
VGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEV
LAGNGCGPDKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GVATNIHGQAITQDANGNDTIIDGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALKEGIEHRGASETDLELSLKRLSGVNERSSGEDVAPLRKELQNCMQNYFGVFRTGE
YMQKGIAQLADLRERIANVKIADKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVTKRDVNFTPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcattcgtactctttcctacgacgccatcatcgttggcggcggtggcgctggt
atgcgcgccgcgctgcaactggcgcaaggcggccacaagactgctgtggtcaccaaggtc
ttcccgacccgttctcacaccgtttccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgattggcgctggcacatgtacgacaccgtcaagggctccgactac
atcggtgaccaggacgcgatcgaatacatgtgctccgtcggcccggaagccgtgttcgag
ctggaacacatgggcctgccgttctcccgtaccgagcagggccgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggtggccaggctgcccgtacctgcgctgcg
gccgaccgtaccggtcacgcgctgctgcacaccctgtaccaggccaacctgaagaacggc
acctcgttcctcaacgagtggtacgccgtcgacctggtgaagaaccaggatggcgccgtg
gtcggcatcatcgccatctgcatcgagaccggcgagaccgtctacatccgctccaaggcc
gtggtgctggccacgggtggcgctggccgcatctatgcgtccaccaccaacgccctgatc
aacaccggtgacggcatcggcatggccctgcgtgcaggcgtgccggtccaggacatcgaa
atgtggcagttccacccgaccggtatcgccggtgccggcgtgctggtgaccgaaggttgc
cgtggcgagggtggctacctgatcaacgcccatggcgagcgcttcatggagcgttacgct
ccgaacgccaaggacctggccggccgcgacgtggtcgcccgctccatggtcaaggaagtg
ctggccggtaacggctgtggcccggacaaggaccacgtgctgctgaagctcgatcacctg
ggcgaggaggtgctgcacagccgcctgccgggtatctgtgaactgtcgaagaccttcgcc
cacgtcgaccccgtcgtcgcgccggtgccggtgatcccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcacccaggatgccaacggcaacgacacc
atcatcgacggcctgttcgcggtcggcgaagtcgcctgcgtatccgtacacggtgccaac
cgtctcggcggcaactcgctgctcgacctggtcgtgttcggtcgtgctgccggcctgcac
ctggaaaaagccctcaaggaaggtatcgagcaccgcggtgcttcggaaaccgacctggag
ctgtcgctcaagcgcctgtccggcgtaaacgagcgcagcagtggcgaagacgtggctccg
ctgcgtaaagaactgcagaactgcatgcagaactacttcggcgtattccgtaccggcgag
tacatgcagaaaggcatcgctcagctggccgacctgcgcgagcgcatcgccaacgtgaag
atcgccgacaagagccaggccttcaacaccgcgcgtatcgaggcgctggaactgcagaac
cttctcgaagtggccgaggctaccgcgatcgcagcggaggtccgcaaggaatcccgtggc
gcgcacgcccgcgaagacttcgaagatcgtgacgacgagaactggctgtgccacaccctg
tatttcccgggtgagaaacgcgttaccaagcgcgacgtcaacttcacgcccaagacagtt
ccggcgtttgaacccaaagtacgtacctattaa
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