Pseudomonas tohonis: TUM18999_23350
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Entry
TUM18999_23350 CDS
T07887
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUM18999_23350 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_23350 (alkA)
Enzymes [BR:
ptw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TUM18999_23350 (alkA)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUM18999_23350 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
RecR_HhH
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
BCG24144
LinkDB
All DBs
Position
complement(2556780..2557670)
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AA seq
296 aa
AA seq
DB search
MNESAPLPPGLHLPYIEPWSWEQFLRHFALRRLPGVERIDAASYCRSFRLGELHGWFRVR
PGAGHLALELSPSCLGREAELVARVRQMFDLDSDPLAIARHLCGDPQLQPLLERYPGLRL
PVAFDPFEQGVRTIIGQQVTVKAAVTIAGRLVERLGEPLADSPDDGPLRLFPTARAIADD
ALPGIGMPGKRVETLRRFADAVASGALELSVAEGVEALIARLCALPGIGPWTAEYIALRA
FGQPDAFPTADLGLLKSPFWGDAGISAKALASRAEHWRPWRAYAAVYLWHSYASEN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatccgcccccctgccgcccggcctgcaccttccctacatcgaaccctggagc
tgggagcagttcctgcgccacttcgccctgcgccgcctgcccggcgtcgagcgcatcgac
gccgccagctactgccgcagcttccgcctcggcgagctgcacggctggttccgcgtgcgc
cccggtgccgggcacctcgccctggagctgagcccctcgtgcctcggccgcgaagcggag
ctggtggcacgggtgcggcagatgttcgacctcgacagcgaccccctggccatcgcccgg
cacctctgcggcgacccgcagctgcaacccctgctggaacgctaccccggcctgcgcctg
ccggtggccttcgaccccttcgagcagggcgtgcgcaccatcatcggccagcaggtgacg
gtgaaggccgcggtgaccatcgccgggcgcctggtggagcgccttggcgagcccctggcg
gattcccccgacgacggcccgctgcgcctgttccccaccgcccgcgccatcgccgacgac
gcgctgcccggcatcggcatgcccggcaagcgggtggagacgctgcgccgcttcgccgac
gcggtggcttccggtgccctggaactctcggtggccgagggcgtcgaagcgctcatcgcg
cggctctgcgccctgcccggcatcggcccctggaccgccgaatacatcgccctgcgcgcc
ttcggccagccggacgccttccccaccgccgacctgggcctgctcaagtcgccgttctgg
ggcgatgccggcatcagcgccaaggccctggccagccgcgccgaacactggcggccctgg
cgcgcctacgccgccgtgtacctctggcacagctacgcatcggagaactga
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