Pseudomonas tohonis: TUM18999_24180
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Entry
TUM18999_24180 CDS
T07887
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptw03000
]
TUM18999_24180
Transcription factors [BR:
ptw03000
]
Prokaryotic type
Helix-turn-helix
Other families
TUM18999_24180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
PAS_4
PAS_9
HTH_30
AAA_2
GAF_2
Mg_chelatase
AAA
HTH_7
HTH_28
HTH_1
HTH_20
AAA_16
HTH_22
Mga
HTH_50
IstB_IS21
HTH_11
HTH_17
HTH_23
HTH_29
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BCG24227
UniProt:
A0A6J4E397
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All DBs
Position
2642568..2644457
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AA seq
629 aa
AA seq
DB search
MPITRNDDVLRQSRLARLRLQSEGELPGGVLREEIDASWRRSLGHGLDCLEGDGAGIEQM
RDLDLLLAGNRLLIDAATPELEYLVRQQGQGGLVILGDAQANVLAIEGQTDALQLAGLRD
LRPGSCWSESLRGTNALGTAVVEGRPTLINSGEHYLDRLSRFACTSVPLKDPHGRVVGVI
DLTREGHLAEPRDSFATLLLAAGNIESRLFGLTYPQQLVLAFHSRPQYLGSAWHGLLALS
LDGELLAANDQACNLLRVERQALLGHRCEELLGARASGFLARLLQGGVSSVQTPRGEFFF
RALHLPRHIGVAPVAPARQTAAPAPELEALAGGNARLARALRMARQGLAGELPVLLLGET
GTGKEVVARALHQASARAGKPFVAVNCAAIPEGLIESELFGYREGAFTGSRKGGMVGRVM
QAQGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGEEQELDIAVICATHRDLQRLVQ
GGQFREDLYYRVNGVSLRLPSLRERDDLATLIAEVLARLGEPGMSLDKDLAELLGGYDWP
GNIRQLEMVLRSALAMREPGERTLGLDHLTDSLLDELTSSRRQPGSIRENELELIRSALE
RHQGNVSAAADALGISRATLYRKLKQLRG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccaataacaagaaacgacgatgtcctgcggcaatcccggctcgcccgcctgcgcctg
cagagcgagggcgagctgcccggcggcgtgctgcgcgaggagatcgacgcctcctggcgg
cgcagcctcggccacgggctcgactgcctcgaaggcgacggcgcgggcatcgagcagatg
cgtgacctcgacctcctgctggcgggcaaccgcctgctgatcgacgccgccacccccgaa
ctcgaatacctggtgcgccagcaggggcagggcggcctggtgatactcggtgacgcccag
gccaacgtcctggccatcgaagggcagaccgatgcccttcagctcgccggcctgcgcgac
ctgcgcccgggcagttgctggagcgaatcgctgcgcggcaccaacgccctgggcaccgcc
gtggtcgagggccggccgaccctgatcaacagcggcgagcactacctggaccgcctcagc
cgcttcgcctgcacctcggtgccgctgaaagacccccatggtcgcgtggtcggcgtcatc
gacctgacccgcgaaggccacctcgccgagccccgcgacagcttcgccacgctgctgctg
gcggccggcaatatcgagagccgcctgttcggcctgacctatccgcagcagctggtgctg
gccttccattcacgcccgcagtacctcggctccgcctggcacggcctgctggccctgagc
ctggacggcgagttgctggccgccaacgaccaggcctgcaacctgctgcgggtggagcgc
caggcgctgctggggcaccgctgcgaggagctgctcggcgcccgcgcctcgggcttcctc
gcacgcctgctgcaaggcggggtgagcagcgtgcagaccccgcgcggcgagttcttcttc
cgtgccctgcacctgccccggcacatcggtgtcgccccggtggcaccggccaggcagacc
gccgcgcccgcgccggagctggaagccctggccggcggcaatgcgcgcctggcccgcgcc
ttgcgcatggcccgccaggggctggccggcgagctgccggtgctgctgctgggcgaaacc
ggcaccggcaaggaagtggtcgcccgcgccttgcaccaggccagtgcgcgcgcgggcaag
cctttcgtcgcggtgaactgcgcggcgatccccgaagggctgatcgaatccgaactcttc
ggctaccgcgagggcgccttcaccggctcgcgcaagggcggcatggtcggccgggtgatg
caggcccagggcggcacgctgttcctcgacgagatcggcgacatgcccctggccctgcag
gcgcgcctgctgcgtgtcttgcaggaacgccgcgtcgcaccgctcggcgcgggcgaggag
caggagctggacatcgccgtgatctgcgccacccaccgcgacctgcagcgcctggtgcag
ggcgggcagttccgcgaagacctctactaccgcgtcaatggcgtgagcctgcgcctgccg
tcgctgcgtgagcgcgatgacctggccaccctcatcgccgaggtgctggcgcgcctcggc
gaacccggcatgagcctggacaaggacctggccgaactgctcggcggctacgactggccg
ggcaacatccgccaactggaaatggtgctgcgctcggccctggccatgcgcgagcccggc
gaacggacgctgggcctggaccacctcaccgacagcctgctggacgagctgaccagcagc
cgtcgccagcccggcagcatccgcgagaacgagctggagctgatccgcagcgccctggag
cgccaccagggcaatgtttccgccgccgccgacgccctgggcatcagccgcgcgacgctg
tatcgcaagctgaagcagctcaggggatga
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