Pseudomonas tohonis: TUM18999_27190
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Entry
TUM18999_27190 CDS
T07887
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TUM18999_27190 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_27190 (ku)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TUM18999_27190 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
BCG24528
UniProt:
A0A6J4E550
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All DBs
Position
2970120..2971019
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AA seq
299 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVGLVSATSSQGVDFDWLDKRNMDPVGYKRINKRTGKEVTKDD
IVKGVELEKGRYVVLSEEEIRAAHPEATQTIDIFAFVDSAAIPLQNIDTPYYLAPVKRGE
KVYALLREALAGTGKVALANVVLHTRQHLAALMPLESALVLVMLRWPAEVRGLESLELGT
AVTEAKLAKAELDMAKRLIKDMSADWQPEEYVDTFTDRIMELVERKASQGRIEAVEAAAG
EEERRSADVIDLTDLLKRSLGGKPGGRPAAKPEAKAAKGAAKPARKTRDKPTRTKAKAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgcgatctggaagggcgccatcagtttcggcctggtgcatatccccgtgggg
ctggtttcggccacgtcgtcccagggggtggacttcgattggctggacaagcgcaacatg
gacccggtgggctacaagcggatcaacaagcgcaccggcaaggaagtgaccaaggacgac
atcgtcaagggcgtggagctggagaagggccgctacgtggtgctcagcgaggaggagatc
cgcgccgcccacccggaagcgacccagaccatcgatatcttcgccttcgtcgacagcgcc
gccattcccctgcagaacatcgacaccccctattacctggcgccggttaagcgtggcgag
aaggtctacgccttgctgcgcgaggcgctcgcgggcaccggcaaggtggccctggccaac
gtggtgctgcacacccgccagcacctggcggcgctgatgccgctggagtcggccctggtg
ctggtgatgctgcgctggcccgccgaggtgcgcggcctggagagcttggagctgggcact
gcggtgaccgaggcgaagctggccaaggccgaactggacatggccaagcggctgatcaag
gacatgagcgcggactggcagccggaggagtacgtggacaccttcaccgaccgcatcatg
gaactggtggagcgcaaggccagccagggccgcatcgaggcggtggaagcggcggccggc
gaggaggagcggcgcagtgccgacgtcatcgacctcaccgacctgctcaagcgcagcctg
ggcggcaagccaggcggcaggcccgccgccaagcccgaggccaaggcggccaagggcgct
gccaagccggcgcgcaagacccgagacaagcccacgcggaccaaggccaaggccggttga
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