Pseudomonas tohonis: TUM18999_30010
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Entry
TUM18999_30010 CDS
T07887
Symbol
clpV1
Name
(GenBank) protein ClpV1
KO
K11907
type VI secretion system protein VasG
Organism
ptw
Pseudomonas tohonis
Pathway
ptw02025
Biofilm formation - Pseudomonas aeruginosa
ptw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TUM18999_30010 (clpV1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
TUM18999_30010 (clpV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptw02044
]
TUM18999_30010 (clpV1)
Secretion system [BR:
ptw02044
]
Type VI secretion system
Imp/Vas secretion system core components
TUM18999_30010 (clpV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
Sigma54_activat
nSTAND3
TniB
AAA_25
AAA_7
AAA_14
ATPase_2
NACHT
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
BCG24810
UniProt:
A0A6J4E5B0
LinkDB
All DBs
Position
complement(3298533..3301232)
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AA seq
899 aa
AA seq
DB search
MSEISRAKLFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLQDSDLHQIIRQF
NIEPARLAKDITEALDRLPRGSTSITDLSSHVEESVERGWVYGSLMFGESQVRTAYLVVG
ILKTPSLRHALSAISREFDKIKVETLIERFDEIVGNSPENALTATDGFNAGAAPGDASGA
MAPAAMGKQEALKRFTVDLTEQARSGKLDPIVGRDDEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVDEPSEHRAILMMRGVASTMEKHHQVQILDEALEAAVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELAIIGREHAIGVAIGSRRTDVENA
LVEERARLAGLEERWNEEKALVDELLATRASLRAAAEPVDGTSREAGADAPSLSEDELNG
LRTKLADLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLGTH
LKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGG
EQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPD
VHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTDLIASLCNDPELMPEPEGIAKSL
REPLLKIFPPALLGRLVTIPYYPLTDEMLKSITRLQLGRIKKRVEGSHKVPFDFDDKVVD
LVVSRCTETESGGRQIDAILTNSMLPDLSREFLGRMLEGRKVEKVTVGAENGEFTYSFD
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcagtcgtgccaagctgttcgggaagctgaacagcctcgcctacaaggcg
atcgaagcggccacggtgttctgcaagctgcgtggcaacccctacgtcgagctggtgcac
tggttccaccagatcttgcaactgcaggactccgacctgcaccagatcatccgccagttc
aacatcgagccggctcgcctggccaaggacatcaccgaggccctggatcgcctgccccgt
ggctcgacctcgatcaccgacctgtcttcccatgtcgaggaatcggtggagcgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccgcctacctggtggtcggc
atcctcaagaccccgagcctgcgccacgcgctgagcgccatctcccgcgagttcgacaag
atcaaggtggaaaccctgatcgagcgcttcgacgagatcgtcggcaactccccggagaac
gccctgaccgccaccgacggcttcaacgccggtgccgccccgggcgatgccagcggcgcc
atggccccagcggccatgggcaagcaggaagccctcaagcgcttcaccgtcgacctcacc
gagcaggcccgcagcggcaagctggacccgatcgtcggccgtgacgacgagatccgccaa
ctggtggacatcctcatgcgtcgccgccagaacaacccgatcctcaccggcgaggccggc
gtgggcaagaccgcggtggtggaaggcttcgccctgcgcatcgtcgccggcgacgtgccg
ccctcgctgaaagacgtcgagctgcgcgccctggacgtgggcctgctgcaggccggcgcc
agcatgaagggcgagttcgagcagcgcctgcgccaggtgatcgaggacgtacagagctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgcc
gccggtacgggcgatgccgccaacctgctcaagccggccctggcgcgcggcacactgcgc
accgtcgcggccaccacctgggccgagtacaagaaacacatcgagaaggaccccgccctc
acccgccgcttccaggtggtgcaggtggacgagccctccgagcaccgcgccatcctgatg
atgcgcggcgtcgcctcgaccatggagaagcaccaccaggtgcagatcctcgacgaggcg
ctggaggcggcggtcaagctgtcccatcgctacattcccgcacgccagctgccggacaag
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtgccg
gccgaggtggacgacagccgccgccgcatcgaggcgctggagaccgagctggccatcatc
ggccgcgagcacgccatcggcgtcgccatcggcagccgccgcaccgacgtggagaacgcg
ctggtcgaggaacgcgcccgcctggccggactggaagagcgctggaacgaagagaaggcc
ctggtcgacgagctgctggccacccgcgccagcctgcgtgccgccgccgagccggtggac
ggcaccagccgcgaggccggcgccgacgccccgagcctgagcgaggacgaactgaacggc
ctgcgcaccaagctggccgacctgcagcagcgcctcaccgcgctgcagggcgagacgccg
ctgatcctgccgaccgtggactaccaggccgtggcctctgtggtcgccgactggaccggc
atccccgtgggccgcatggcgcgcaacgagatcgagaccgtgctcaacctgggcacccac
ctgaagaagcgcatcatcggccaggaccatgccctggaaatgatcgccaagcgcatccag
acctcccgcgcggggctcgacaacccgagcaagccgatcggcgtgttcatgctcgcgggc
acctcgggcgtcggcaagaccgagaccgcgctggccctggccgaagccatgtacggcggt
gagcagaacgtcatcaccatcaacatgagcgagttccaggaagcacacaccgtctccacc
ctcaagggtgccccgcccggctacatcggctacggcgagggcggcgtgctgaccgaggcg
gtacggcgcaagccctacagcgtggtgctgctggacgaggtggagaaggcccacccggac
gtgcacgagatcttcttccaggtgttcgacaagggcgtgatggaagacggcgaaggccgg
gtgatcgacttcaagaacaccctgatcctgctcaccaccaacgccggcaccgacctgatc
gccagcctgtgcaacgaccccgagctgatgcccgaacccgagggcatcgccaagtcgctg
cgcgagccgctgctgaagatcttcccgccggcgctgctgggccgcctggtgaccatcccc
tactacccgctgaccgacgagatgctgaaaagcatcacccgcctgcagctgggccgtatc
aagaagcgcgtggagggctcgcacaaggtgcccttcgacttcgacgacaaggtggtggac
ctggtggtctcgcgctgcaccgagaccgagagcggtggccgccagatcgacgccatcctc
accaacagcatgctgccggacctctcccgcgagttcctcggccgcatgctggaaggccgc
aaggtcgagaaggtgacggtgggcgccgagaacggcgagttcacctacagcttcgattga
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