Pseudomonas tohonis: TUM18999_38370
Help
Entry
TUM18999_38370 CDS
T07887
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03030
DNA replication
ptw03430
Mismatch repair
ptw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM18999_38370
03430 Mismatch repair
TUM18999_38370
03440 Homologous recombination
TUM18999_38370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptw03032
]
TUM18999_38370
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_38370
Enzymes [BR:
ptw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM18999_38370
DNA replication proteins [BR:
ptw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM18999_38370
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM18999_38370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
AAA_14
AAA_30
AAA_2
AAA_19
DUF3646
nSTAND3
PIF1
TsaE
AAA_7
Rad17
SKI
AAA_24
Mg_chelatase
zf-CXXC
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BCG25646
UniProt:
A0A6J4E8T7
LinkDB
All DBs
Position
complement(4258656..4260842)
Genome browser
AA seq
728 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGISSTPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLTHVLGAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLHALLQGDARGVLEAIRHLAEQGPDWSGVLAEILNVLHRVAIAQALPD
AVDNGQGDRDRVLALAEALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADVDGAPRVTLKDPGISKATADSSNTPVAGASIAAPVAPVSPVATVAAPQPVAGPVVASP
AVVQTPVAPEPVAATPVVETPVAPAVVEAAPVAEPAPAPAPQPQPVAEPVQAAQPAVTPA
EVIDLPWEERPAEPAQAATAIVEPAPVEQPIEPSAPAVEIAAPPAQPAAEPLAVAQPVAA
QALPEPVAIDDADDDEPPPGDYDDYYEADVDSIAYMDELPVAEPEPVTVPEVVPAAQPAT
GLAAEWLDLFPRLGISGLTGNIAANCTLVSVEGDVWRLHLDPAQSALFNANQQRRINDAL
NQYHGRTLVLEVEVRRPEQETPAQAAARKRAARQRDAEESIALDPLVQKMIEQFGASVRP
DTIEPLDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctgaaggccctgatcaacgccctggacaaccagcgcctgcaccatgcc
tacctgttcaccggtacccgtggcgtgggcaagaccaccatcgcgcgcatcctggccaag
tgcctgaactgcgagaccggcatcagctccacgccctgtggccagtgctcggtgtgccgc
gagatcgacgaaggccgtttcgtcgacctgatcgaggtggacgccgcgagccgcaccaag
gtcgaggacacccgcgaactgctggacaacgtgcagtacgcgccgagccgtggtcgctac
aaggtctacctcatcgacgaagtgcacatgctctccacgcactcgttcaacgcgctgctc
aagaccctcgaagagccgccgccccatgtgaagttcctgctggccaccaccgacccgcag
aagctgcccgtcaccatcctttcgcgctgcttgcagttctccctgaagaacatgccgccg
gagcgtgtggtcgagcacctgacccacgtcctgggtgccgagaacgtgccgttcgagccc
gatgccctatggctcctggggcgtgccgccgacggctcgatgcgcgacgccatgagcctc
accgaccaggccatcgccttcggcgagggcaaggtcctggctgccgacgtgcgcgccatg
ctcggcacgctcgaccatggccaggtctatggcgtgctccatgcgctgctgcagggcgat
gcccgtggcgtgctggaggccatccgccacctggccgagcagggcccggactggagtggc
gtgctcgccgagatcctcaacgtgctgcaccgtgtcgccatcgcccaggccttgccggac
gcggtggacaacggccagggcgaccgtgatcgcgtactggccctggccgaggcattgcct
gccgaagacgtgcagttctattaccagatgggcctgatcggccgtcgtgacctgcccctg
gcgccggacccgcgcggtggcttcgagatggtgctgctgcgcatgctggcgttccgtcca
gcggatgtggacggtgcgccgagggtcacgctaaaggacccgggaatcagcaaggccacg
gctgattcctcgaacacaccagtggccggcgccagcatcgcggcgccggttgctcccgta
tcccccgtcgcgacggtagcggccccccagccggttgccgggcccgtggtcgcgtctcct
gccgtcgtgcagaccccggtcgcgccggagccggtggctgccactcccgtcgtcgaaaca
ccggtcgcacccgccgtggtcgaggcggctcccgttgcagagcctgcacctgcacctgcg
ccgcagccgcagccagtggccgagccggtccaggccgctcagcccgctgtcaccccggcc
gaagtgatcgacctgccgtgggaagagcgtcctgccgaacctgcgcaggccgcgactgcg
atcgtcgagcctgcaccggtcgagcagcccatcgagccgtccgctccggcagtggagatt
gccgctccccccgcgcagcccgccgccgaaccgcttgccgtggcgcagcccgttgccgcc
caggcgcttcccgagcccgtcgccatcgacgatgcggacgacgacgagccgccgcccggc
gactatgacgattactacgaggccgatgtcgactccatcgcctacatggacgagctgccg
gtcgccgaacccgagcctgtcaccgtgccggaggtcgtacccgccgcgcaacccgccacc
ggcctcgccgccgaatggctggacctgttcccgcgcctgggcatcagcggcctcaccggc
aacatcgcggccaactgcaccctggtctccgtggagggcgatgtctggcgcctgcacctc
gacccggcgcagagtgccctgttcaacgccaaccagcagcgtcgtatcaacgatgcgctg
aatcagtaccacgggcgtaccctggtgctggaggtggaggtgcgcaggccggagcaggag
acccccgcccaggccgccgcccgcaagcgcgccgcgcgccagcgcgacgccgaggaatcc
atcgcgctcgacccgctggtacagaagatgatcgaacagttcggcgcgagcgttcgcccg
gacaccattgaaccccttgaccgctga
DBGET
integrated database retrieval system
