Pseudomonas tohonis: TUM18999_45720
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Entry
TUM18999_45720 CDS
T07887
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptw03009
]
TUM18999_45720 (rimO)
Enzymes [BR:
ptw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TUM18999_45720 (rimO)
Ribosome biogenesis [BR:
ptw03009
]
Prokaryotic type
ribosomal protein modification factors
TUM18999_45720 (rimO)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
GbpA_2
FAP42_B3
Motif
Other DBs
NCBI-ProteinID:
BCG26381
UniProt:
A0A6J4EDB2
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All DBs
Position
5035542..5036864
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDVIGEAIAENGKVIVTGCMGVAEDSIRNVHPSVLAVTGPQQYEQVVNAVHEVIPPKAE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDVKYKTDFWNGQPVKTRMLELCQALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLSEAQLDRVGCFQYSPVEGAPANDLGLEPVPDDIKQERW
ERFMAHQQAISAERLQLKIGKEIEVLIDEVDEQGAVGRSFADAPEIDGSVFIDSTDLKPG
DKVIVRVVDADEYDLWAERV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcaacgcccaaagtcggtttcgtatcccttggttgcccaaaagccacggtc
gactccgaacgcatcctcacccagctgcgcatggaagggtacgagatcgtcccgacctac
caggatgccgacgtcgtggtggtcaacacctgcggcttcatcgacagcgccaaggccgag
tccctggacgtgatcggtgaagccatcgccgagaacggcaaggtcatcgtcaccggctgc
atgggcgtggccgaggacagcatccgcaacgtgcaccccagcgtgctcgccgtcaccggc
ccgcagcaatacgagcaggtggtcaacgcggtgcacgaggtgatcccgccgaaagccgag
cacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgaccccccgccactac
gcgtacctgaagatttccgagggctgcaaccacacctgcagcttctgcatcatcccctcc
atgcgcggcaagctggtcagccgcccggtgggtgatgtgctgagcgaggccgagcgcctg
gtcaaggccggcgtgaaggagctgctggtgatctcccaggacaccagcgcctacggcgtc
gacgtcaagtacaagaccgacttctggaacggccagccggtgaagacccgcatgctggag
ctgtgccaggcgctgtcgagcatgggcgtgtgggtgcgcctgcactacgtctacccgtac
ccgaacgtcgacgacgtgatcccgctgatggccgccggcaagctgctgccctacctggac
atccccttccagcacgccagcccgaaggtgctcaaggccatgaagcgcccggccttcgag
gacaagaccctggcgcgcatcaagaagtggcgcgagatctgccccgagctgaccatccgc
tccaccttcatcgtcggcttccccggcgagaccgaggaagacttccagtacctgctcgac
tggctgagcgaagcccagctggatcgcgtcggctgcttccagtactccccggtcgaaggc
gccccggccaacgacctgggcctggagccggtgccggacgacatcaagcaggagcgctgg
gagcgcttcatggcgcaccagcaggcgatctccgccgagcgcctgcagctgaagatcggc
aaggagatcgaagtgctgatcgacgaagtggacgagcaaggcgcggtcggccgctccttc
gccgatgccccggagatcgacggcagcgtgttcatcgacagcaccgacctgaagccgggc
gacaaggtgatagtccgcgtggtcgatgccgacgagtacgacctctgggccgagcgcgtc
tga
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