Pseudomonas tohonis: TUM18999_47050
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Entry
TUM18999_47050 CDS
T07887
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00300
Lysine biosynthesis
ptw01100
Metabolic pathways
ptw01120
Microbial metabolism in diverse environments
ptw01230
Biosynthesis of amino acids
Module
ptw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TUM18999_47050 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptw01002
]
TUM18999_47050 (dapE)
Enzymes [BR:
ptw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
TUM18999_47050 (dapE)
Peptidases and inhibitors [BR:
ptw01002
]
Metallo peptidases
Family M20
TUM18999_47050 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
BDM
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
BCG26514
UniProt:
A0A6J4EC03
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All DBs
Position
5148299..5149438
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AA seq
379 aa
AA seq
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MTALSPTLELACELIRRPSVTPVDEGCQELMMRRLEAVGFRIERMRIEDVENFWAIRGGE
GPVLCFAGHTDVVPTGPLQAWQHQPFDAKIDEHGMLCGRGAADMKGSLASMIIAVERFVA
AHPGHKGAIAFLITSDEEGPAHHGTKAVVERLAARGERLDWCIVGEPSSTTLVGDVVKNG
RRGSLGATLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQVSNL
NAGTGATNVIPGELVAVFNFRFSTESTVEGLQQRVNAILDKHGLDYHVEWALSGLPFLTE
PGELLDAVAASIKAVTGRETTPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVNERVLA
SDLDLLSDIYEQTLVRLLA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctgtcccccaccctcgagctcgcctgcgagctcatccgccgcccctcggtc
acaccggtcgacgaaggctgccaggagctgatgatgcgccgcctggaggccgtcggcttc
cgcatcgagcgcatgcgcatcgaggacgtggagaacttctgggccatccgtggcggcgaa
ggccccgtgctgtgcttcgccggccataccgacgtggtcccgaccggcccgctgcaggcc
tggcagcaccagcccttcgacgccaagatcgacgagcacggcatgctgtgcggccgcggc
gccgcggacatgaagggcagcctcgcgtcgatgatcatcgccgtcgagcgcttcgtcgct
gcgcaccctggccacaagggcgccatcgccttcctcatcaccagcgacgaggaaggcccc
gcgcaccatggcaccaaggccgtggtcgagcgcctggccgcccgtggcgagcgcctggac
tggtgcatcgtcggcgagccctccagcaccaccctggtgggcgacgtggtgaagaacggt
cgccgtggctccctcggcgccaccctcaccgtgcgcggcgtgcaaggccacgtggcctac
ccgcacctggcgaagaacccgatccacctggccgccccggccctggcggaactcgccgcc
gaacactgggatgacggcaatgccttcttcccgccgaccagcttccaggtctccaacctc
aatgccggcaccggcgccaccaacgtgatccccggcgagctggtggcggtgttcaacttc
cgcttctccaccgagtccacggtcgaaggcctgcagcagcgggtcaacgccatcctcgac
aagcacggcctggactatcacgtggagtgggccctgtccggcctgccgttcctcaccgaa
ccgggcgaactgctcgacgcggtggccgccagcatcaaggcggtgaccggccgcgagacc
acgccctccaccagcggcggcacctccgacggccgcttcatcgccaccatgggcacccaa
gtggtggaactcggcccggtcaacgccaccatccaccaggtcaacgagcgggtgctggcc
agcgacctcgacctgctgagcgacatctacgaacagaccctcgtgcgactgctggcctga
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