Pseudomonas tohonis: TUM18999_47210
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Entry
TUM18999_47210 CDS
T07887
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00061
Fatty acid biosynthesis
ptw00071
Fatty acid degradation
ptw01100
Metabolic pathways
ptw01212
Fatty acid metabolism
ptw02024
Quorum sensing
ptw04146
Peroxisome
Module
ptw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TUM18999_47210
00071 Fatty acid degradation
TUM18999_47210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TUM18999_47210
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM18999_47210
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptw01004
]
TUM18999_47210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptw04147
]
TUM18999_47210
Enzymes [BR:
ptw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TUM18999_47210
Lipid biosynthesis proteins [BR:
ptw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TUM18999_47210
Exosome [BR:
ptw04147
]
Exosomal proteins
Exosomal proteins of breast milk
TUM18999_47210
Exosomal proteins of breast cancer cells
TUM18999_47210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF8167_3rd
Motif
Other DBs
NCBI-ProteinID:
BCG26530
UniProt:
A0A6J4EAB3
LinkDB
All DBs
Position
5163562..5165334
Genome browser
AA seq
590 aa
AA seq
DB search
MTTQQPPADLPSIPALLAWRAERTPDWPAAQVRHADAWRSLDWGEMARRSEALARALVAA
GVEPGDRVAIWSRTRLEWSLLDFAVLMAGATSVGLYPSLTPAQATQQLQRAGCRLLFVER
PGQAQGLALPGLRVVAMDGDGLAALDAFIAAGNDVPADQVRRRWQALERTSLANLVFTSG
TTGEPKAAMLSHGNLLAAVAAYPLPPQRYTGLAFLPMAHVGERVIGQYQRLWCGAQAAYV
PDINDVPQAIAEVQPDFFGSVPRLFEKLHGAVMAQREALSPGKRRVLDWALRTGARQRGG
LRLLLARRLVLDGLRQRLFGARIRALVSGGAPLDAELVAFFTALGVPLCEGWGMSESTAF
LTSNEAGLAKAGSVGRPLQGVEVRIADDGEVLVRGPQVFQGYFQQPEKTAEAFTLDGWLR
TGDLGRLDAAGHLWLTGRKKELIITAGGKNIAPTPIEARLKQHPLVEQALVHGDRRKHLS
ALLALEPQSLAIWAKRQGLAGDAEAWLQAPALLAELQGHVDTINAELSQVERIKAWALLP
RLLSQEQDELTPTQKLKRPVVERNFAALLDGMYEESPGGALSSGSPPSRG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcaacaaccgccggccgatcttcccagcatccccgccctcctcgcctggcgc
gccgagcgcacgcccgactggcccgccgcccaggttcgccacgccgatgcctggcgcagc
ctcgactggggcgaaatggcccgccgcagcgaggccctggccagggccctggtcgccgcc
ggtgtcgagcccggtgaccgcgtggcgatctggagccgcacccgcctggagtggagcctg
ctggatttcgccgtactcatggccggcgccaccagcgtcggcctctacccgagcctcacc
ccggcccaggcgacccagcagttgcagcgtgccggctgccggctgctgttcgtcgagcga
ccgggacaggcgcagggcctggccttgccgggcctgcgcgtcgtcgccatggacggcgac
gggcttgcggccctggacgccttcatcgccgcaggcaacgacgtaccggccgatcaggtt
cgtcgacgctggcaggcactggagcgcacgtccctggccaacctggtgttcacctccggc
accacgggcgaacccaaggcggccatgctcagccacggcaacctcctcgccgccgtcgct
gcctacccgttgccaccgcagcgctacaccgggctcgccttcctgcccatggcccatgtc
ggggagcgggtgatcggccagtaccagcgcctctggtgcggcgcccaggccgcctacgtg
ccggacatcaacgacgtgccccaggccatcgccgaggtacagccggacttcttcggcagc
gtgccccggctcttcgagaagctgcacggggcggtcatggcccagcgtgaggccctgtcg
cccggtaaacgccgcgtgctcgactgggcattgcgcaccggcgcccgccagcgcggcggc
ctgcgcctgctgctagcccggcgcctggtgctggatggcctgcgccagcgcctgttcggc
gcgcgcatccgcgccctggtcagcggtggcgccccactcgatgccgaactggtggccttc
ttcaccgccctcggcgtgccgctctgcgaaggctggggcatgtccgagtccaccgccttc
ctcaccagcaacgaagccgggttggccaaggccggctcggtgggccgccccctgcaaggc
gtcgaggtgcgcatcgccgatgacggcgaggtgctggtgcgtgggccgcaggtgttccag
ggctatttccagcaaccggagaagaccgccgaggccttcaccctcgacggctggctgcgc
accggcgacctgggccggctggacgccgccggccacctctggctgaccgggcgcaagaag
gagctgatcatcaccgccggcggcaagaacatcgcgccgacgcccatcgaggcgcgcctc
aagcagcatcccctggtggagcaggccctggtgcacggcgaccgccgcaagcacctcagc
gccctcctcgccctggagccgcaaagcctggccatctgggcgaaacgccagggcctggcg
ggcgatgccgaggcctggctgcaggcaccggcgctgctggcggagctgcaggggcacgtc
gatacgatcaacgccgagctgtcgcaggtggagcggatcaaggcctgggcgctgctgccg
cgcctgctcagccaggagcaggacgagctcacgcccacgcagaagctcaagcgcccggtg
gtggagcgcaacttcgcggcgctgctggatgggatgtacgaggagagccccggcggggcg
ctgtccagtgggtccccgccttcgcggggatga
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