Pseudomonas tohonis: TUM18999_48440
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Entry
TUM18999_48440 CDS
T07887
Name
(GenBank) ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ptw
Pseudomonas tohonis
Pathway
ptw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM18999_48440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptw02000
]
TUM18999_48440
Transporters [BR:
ptw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TUM18999_48440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BCG26653
UniProt:
A0A6J4E9M1
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All DBs
Position
complement(5296263..5297219)
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AA seq
318 aa
AA seq
DB search
MHVLAWPGYADADVVKTFEQQHQVKVVVTLVDSDESLWDKLHAQDGELFDVLAANTAEIQ
RYYHNGMLQPLDLARLPNTRHQLPRFQDLESIEGLIREGQVYAVPFTYAAMGLIYDRQQV
PVPPRSMAEMWNPRYQGKVLAFNSAQHNFSFTALTLGLADPFHLRADDFRRVTGQLVALR
RNLLAYYSLPEEATGLFLRHKAALLFANYGMQQVTQLRQAGADVGYVIPDEGAIAWLDCW
AMTRTATNRELALAWIDYMLEPRVGRLLSERQGLANTSEVPTEPAGDARLIWLQPVEDVG
RREALWSRIVSGDREERF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgtgctggcctggccgggctacgccgatgcggatgtggtgaagacgttcgagcag
cagcaccaggtgaaggtggtggtgaccctggtggattccgacgaatcgctctgggacaag
ctgcacgcacaggacggcgagctgttcgacgtgctcgccgccaacaccgccgagatccag
cgctactaccacaacggcatgctgcaaccgctggacctcgcccgcctgcccaacacccgt
caccagttgccgcgcttccaggatctcgaatccatcgagggactgatccgcgaagggcag
gtgtatgcggtccccttcacctacgcggcgatggggctgatctacgaccgccagcaggtg
cctgtgccgccgcgctcgatggcggagatgtggaacccgcgctaccagggcaaggtgctg
gccttcaacagcgcgcagcacaacttctccttcaccgcgttgacgctggggctggccgac
cccttccacctgcgggccgatgacttccgccgggtgaccgggcaactggtggccctgcgc
cgcaacctgctggcgtactacagcctgccggaggaggcgaccggcctgttcctgcggcac
aaggcggcgctgctgttcgccaactacggcatgcagcaggtgacgcagctgcgccaggcg
ggggccgacgtgggctatgtgatccccgacgagggggccatcgcctggctggactgctgg
gccatgacgcgcaccgccaccaatcgtgaactggcactggcctggatcgactacatgctc
gaaccccgggtcggcaggctgctgagcgagcgccagggcctggccaacaccagcgaggtg
cccacggagccggccggggatgcgcggctcatctggctgcagccggtggaggacgtgggg
cgccgcgaggcgctgtggagccgcatcgtgtccggtgaccgggaggagaggttctag
DBGET
integrated database retrieval system
