Pseudomonas tohonis: TUM18999_49280
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Entry
TUM18999_49280 CDS
T07887
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TUM18999_49280 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_49280 (xseA)
Enzymes [BR:
ptw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TUM18999_49280 (xseA)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TUM18999_49280 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Spc29
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
BCG26737
UniProt:
A0A6J4EAG2
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All DBs
Position
5380032..5381411
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AA seq
459 aa
AA seq
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MFKDPFQRLGLDREVLTVSQLNQRARHLLEDVFPQVWVEGEISNLAKPASGHLYFTLKDS
QAQVRCALFRQNAAKVRQALRDGLAVKVRGKVSLFEGRGDYQLIADAVEPAGDGALRLAF
EALKEKLAAEGLFDAGAKRPLPVHPQRIGIVSSPTGAVIRDIISVFRRRAPQVELTLVPT
AVQGREATAQIVRAIERADAQGFDALILARGGGSLEDLWCFNEEAVARAVAACRTPIVSA
VGHETDVSIADFVADVRAPTPSAAAELLAPDSSNLRQRLESLQRRLVLRMQQQIAHHHLR
IEGLARRLRHPGERLRQQAQRLDDLEMRLQRALDRQLSTRRERFARLETRLAAQHPGRAL
SLLRQRLDSLAARLPRAMQEGLKERRLQLQSQVQTLNVVSPLATLGRGYSILLDERGQAI
RNAAQTRPGQRLKARLGEGELDVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaccctttccaacggctcggcctcgaccgcgaggtgctgaccgtcagccag
ctcaaccagcgtgcccgccacctgctggaggacgtgttcccccaggtctgggtggagggc
gagatctccaacctggccaagcccgcttccggccacctctacttcaccctcaaggacagc
caggcccaggtgcgctgcgcgctgttccggcagaacgccgccaaggtgcgccaggcgctg
cgtgacggcctcgcggtgaaggtgcgcggcaaggtctcgctgttcgagggccgtggcgac
taccagttgatcgccgacgccgtggagcccgccggcgacggcgccctgcgcctggccttc
gaggcactgaaggaaaagctcgccgccgagggcctgttcgacgccggggccaagcgcccg
ctgcccgtccacccgcaacgcatcggcatcgtcagctcgcccacgggcgcggtgatccgc
gacatcatcagcgtgttccgccgccgcgccccgcaggtggaactgaccctggtgcccacc
gccgtgcagggccgcgaggccaccgcgcagatcgtccgcgccatcgagcgggccgatgcc
cagggcttcgacgcgctgatcctcgcccgtggcggcggctcgctggaagacctctggtgc
ttcaacgaggaagccgtggcccgcgccgtggcggcctgccgtacccccatcgtcagcgcc
gtggggcacgagacggacgtctccatcgccgacttcgtcgccgacgtccgcgcgcccacg
ccctccgctgccgccgaactcctggccccggactccagcaacctgcgccagcgcctggag
agcctgcagcgacgcctggtgctgcgcatgcagcaacagatcgcccatcaccacctgcgc
atcgagggcctggcccgccgcctgcgccacccgggcgagcgcctgcgccagcaggcccag
cgcctcgacgacctggaaatgcgcctgcaacgcgccctcgaccgccagctgagcacccgc
cgggaacgcttcgcgcgcctggagacgcgcctggccgcgcaacacccgggccgcgccctg
agcctgttgcgccagcgcctggacagcctcgccgcgcgcctgccccgtgcgatgcaggaa
ggcctcaaggagcgccgcctgcagctgcagagccaggtgcagacgctcaatgtcgtcagc
ccgctggcgaccctcggccggggctacagcatcctgctcgacgagcgcggccaggccatc
cgcaacgccgcccagacccgccccggccagcgcctcaaggcccggctgggtgagggcgag
ctcgacgtgcgggtcgaagacaaccacctcaccccggtcaccctctccctgctggattga
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