Pseudomonas tohonis: TUM18999_49690
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Entry
TUM18999_49690 CDS
T07887
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03030
DNA replication
ptw03430
Mismatch repair
ptw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM18999_49690 (holC)
03430 Mismatch repair
TUM18999_49690 (holC)
03440 Homologous recombination
TUM18999_49690 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptw03032
]
TUM18999_49690 (holC)
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_49690 (holC)
Enzymes [BR:
ptw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM18999_49690 (holC)
DNA replication proteins [BR:
ptw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM18999_49690 (holC)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM18999_49690 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Mrp13
Motif
Other DBs
NCBI-ProteinID:
BCG26778
LinkDB
All DBs
Position
5420819..5421238
Genome browser
AA seq
139 aa
AA seq
DB search
MTRVEFYVLSSSTPADRLRAACQLASKAWRHGLPVFVRCADKAQGAELDDLLWRFKAETF
IPHGLHEDDPQAPVVIGGDEQPEAAQGLLINLDASLSPHLERFSRIIEIVNQEPALLAAC
RENFRTYRQRGYDPKRVEL
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgtcgagttctacgtcctttcctccagcaccccggcggaccgcctgcgcgcc
gcctgccagctggcgagcaaggcctggcgccatggcctgccggtgttcgtgcgctgcgcc
gacaaggcccagggcgccgagctggacgacctgctgtggcgcttcaaggccgagaccttc
atcccccacggcctgcacgaagacgacccgcaggcgccggtggtgatcggcggcgacgag
cagcccgaggccgcccagggcctgctgatcaacctcgacgccagcctctcgccgcacctc
gagcgtttcagccgcatcatcgagatcgtcaaccaggagccggccctgctggccgcctgc
cgtgagaatttccgtacctaccgccagcgcggctatgatccaaagcgagtcgaactctaa
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