Pseudomonas tohonis: TUM18999_49960
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Entry
TUM18999_49960 CDS
T07887
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM18999_49960 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptw03019
]
TUM18999_49960 (rhlB)
Enzymes [BR:
ptw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TUM18999_49960 (rhlB)
Messenger RNA biogenesis [BR:
ptw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TUM18999_49960 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
TMEM260_2
Motif
Other DBs
NCBI-ProteinID:
BCG26805
UniProt:
A0A6J4EBJ3
LinkDB
All DBs
Position
5457685..5459169
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AA seq
494 aa
AA seq
DB search
MTVLKALKKIFGKGEEPVSGVAPTAPATQAPTRTESEKRPAQPKKAPRAPAEKPATPAAA
EQAPRAEKKPRSDKPRTDKPRRERPPKPVDTWKLEDFVVEPMEGKTRFHDFKLAPTLMHA
IHDLGFPYCTPIQAGVLGFTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMG
EPRALIIAPTRELVVQIAKDAQALTKYTGLNVMSFVGGMDFDKQLKQLESRFCDILVATP
GRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKGERQTLLFSATFT
DDVMNLAKQWTVEPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVF
ANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHV
DGISHVINFTLPEDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEELLGRKINCE
TPPAELLKSVPRKH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaaaaaaatctttggcaagggcgaagagcccgtctccggc
gtcgccccgaccgccccggccacccaggccccgactcgcaccgagagcgaaaaacgcccc
gcccagcccaagaaggcgccgcgcgccccggctgaaaaacccgccacccccgccgctgcc
gagcaggccccccgcgccgagaagaagccccgcagcgacaagccccggacagacaagccg
cgccgcgagcgcccgcccaaaccggtggacacctggaagctggaagacttcgtggtggag
ccgatggaaggcaagacccgcttccacgacttcaagctggcaccgaccctgatgcacgcc
atccacgacctgggcttcccctactgcacgccgatccaggcgggcgtactgggcttcacc
ctcaagggccaggacgccatcggccgcgcccagaccggcaccggcaagaccgccgccttc
ctgatctcgatcatcacccagctgctgcagaccccgccgccgaaagagcgctacatgggc
gagccccgcgcgctgatcatcgcgccgacccgcgagctggtggtgcagatcgccaaggac
gcccaggccctgaccaagtacaccggcctgaacgtgatgagcttcgtcggcggcatggac
ttcgacaagcagctcaagcagctggagtcgcgcttctgcgacatcctcgtggccaccccc
ggccgcctgctggacttcaaccagcgcggcgacgtgcacctggacatggtcgaggtgatg
gtgctggacgaagccgaccgcatgctcgacatgggcttcatcccgcaggtccgccagatc
atccgccagaccccgcccaagggcgagcgccagaccctgctgttctccgccaccttcacc
gatgacgtgatgaacctcgccaagcagtggaccgtcgaaccggccatcgtcgagatcgag
ccggagaacgtcgccagcgacaccgtcgagcagcacgtctacgccgtcgccggcagcgac
aagtacaagctgctctacaacctggtcgcccagaacaactgggaacgggtgatggtcttc
gccaaccgcaaggacgaggtgcgccgcatcgaggaacgcctgaccaaggacggcatcagc
gccgcccagatgtccggcgacgtgccccagcacaagcgcatcaagaccctggaaggcttc
cgcgaaggcaagatccgcgtactggtcgccaccgacgtcgccggccgcggcattcacgtc
gacggcatcagccacgtcatcaacttcaccctgccggaagacccggacgactacgtgcac
cgcatcggccgtaccggccgtgccggcaccagcggcacgtccatcagcttcgccggcgag
gacgatgccttcgccctgccgccgatcgaggaactgctgggtcgcaagatcaactgcgaa
accccgcccgccgagctgctcaagtcggtgccgcgcaagcactga
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