Pseudomonas tohonis: TUM18999_51390
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Entry
TUM18999_51390 CDS
T07887
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_51390 (phrB)
Enzymes [BR:
ptw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TUM18999_51390 (phrB)
DNA repair and recombination proteins [BR:
ptw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TUM18999_51390 (phrB)
Prokaryotic type
TUM18999_51390 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ExsD_M
Motif
Other DBs
NCBI-ProteinID:
BCG26948
UniProt:
A0A6J4EBY4
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All DBs
Position
5606561..5607991
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AA seq
476 aa
AA seq
DB search
MRQLMWFRCDLRVQDNTALSAAMAAGPTLALYLITPGQWLEHDDAPAKVDFWLRNLVALQ
AELARLNVPLLVRHAEHWDQAAEAVARLCHEHQVGAVHVNEEYGIHESARDAAVKARLQA
DDVRLRSHLDQLLFKPGSVLTKSDGYFQVFSQFRKVCYARLHAALPACAPAPAVQAPLEI
EGDAIPASVQGFATPATPLLALWPAGEAHALQRLEAFTDQQIEHYQDQRDFPARPGTSQL
SPYLAAGVLSPRQCLHAALRSNQGEFESGNAGAVTWINELLWREFYKHILVGYPRVSRHR
AFRPETEALRWRDAPEELHAWQQGRTGIPIVDAAMRQLLATGWMHNRLRMVVAMFLTKNL
LIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPVSQSQRFDPQGVFI
RQWVPELAGLDARDIHDPAARGGLFLPAGYPQPMVDLSSSRDRAIAAFRNLPKVAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaattgatgtggttccgttgcgaccttcgcgttcaggacaacaccgccttgtcc
gccgcgatggcagccgggccgaccctcgctctctacctgatcacgcccgggcagtggctg
gaacacgacgacgcccccgccaaggtggacttctggttgcgcaacctcgtcgcgctccag
gccgagctggcacgcctgaacgtgccgttgctggtgcgccacgccgagcactgggaccag
gccgcggaagccgtcgcccgcctctgtcatgaacaccaggtcggcgccgtccacgtcaac
gaggagtacggcatccacgagagcgcccgcgacgcggcggtgaaggcgcggctgcaggcg
gacgacgtgcgcctgcgcagccacctcgaccagctgctgttcaagcccggcagcgtgctg
accaagagcgacggctacttccaggtcttcagccagttccgcaaggtctgctatgcacgg
ctgcacgccgccctgcccgcctgtgcgccggcgcccgccgtgcaggccccgctggagatc
gagggcgacgcgatccccgcatcggtccagggcttcgccacccccgccaccccactgctg
gcactctggccggccggcgaggcacatgccctccagcgcctcgaagccttcaccgaccag
cagatcgagcactaccaggaccaacgcgacttccccgcccgccccggcaccagccagctg
tcgccctacctcgccgcaggcgtgctgtcgccgcgccaatgcctgcatgccgcgctgcgc
agcaaccagggcgagttcgaatcgggcaacgccggcgccgtcacctggatcaacgagctg
ctctggcgcgagttctacaagcacatcctggtgggctacccgcgcgtcagccggcatcgc
gccttccgccccgaaaccgaggcgctgcgctggcgcgacgcaccggaggagctgcacgcc
tggcagcaggggcgtaccggcatccccatcgtcgacgcggcgatgcgccagttgctggcc
accggctggatgcacaaccgcctgcgcatggtggtggccatgttcctcaccaagaacctg
ctgatcgactggcgcgagggcgagcgctggttcatgcgtcacctgatcgacggcgacctg
gccgccaacaatggcggctggcagtggagcgcctccaccggcaccgacgcagcgccctac
ttccgcatcttcaacccggtcagccagtcccagcgcttcgacccgcaaggcgtgttcatc
cgccaatgggtgccggagctggccggcctggacgccagggacatccacgacccggccgcc
cgtggcgggctgttcctgccggcaggttatccacagcccatggtcgacctctcctccagc
cgcgaccgtgccatcgccgccttccgcaacctgcccaaggtggccgcatga
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