Pseudomonas tohonis: TUM18999_52710
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Entry
TUM18999_52710 CDS
T07887
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptw
Pseudomonas tohonis
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptw03016
]
TUM18999_52710 (truB)
Enzymes [BR:
ptw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TUM18999_52710 (truB)
Transfer RNA biogenesis [BR:
ptw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TUM18999_52710 (truB)
Prokaryotic type
TUM18999_52710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BCG27080
UniProt:
A0A6J4EBR4
LinkDB
All DBs
Position
complement(5747240..5748157)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGILILDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTGDAEGEVLERREVTVGRADIEARLADFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLAFESAQARFAVACSKGTYI
RTLVEDLGQVLGCGAHVAELRRTQAGPFSLAQAITLDELEKAHAEGGNEALDRFLLPEDS
GLEHWPLVQLSEHSAYYWLHGQPVRAPEAPKFGMLRVQDHNGRFIGIGEVSDDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaagcgcatccgccgcaatgtcagcggcatcctgattctcgacaagccc
cgtggcatgagttccaaccaggccctgcagaaggtgcgctggctgctcaatgccgagaag
gccggccataccggcagcctcgatcccctggccaccggcgtgctgccgctgtgcttcggc
gaggcgaccaagttctcccagtacctgctggatgccgacaagggctacgagaccctggcc
cagctcggcgtcaccaccaccaccggggatgcggaaggcgaagtcctcgagcgtcgcgag
gtgaccgtcggtcgtgccgatatcgaggcccgtctcgctgatttccgtggcgaaatcaag
cagatacccccgatgtactcggcgctgaagaaagacggccagccgctgtacaagctggca
cgcgcgggcgaggtagtggagcgcgaagcgcgttctgttactattgcgcgcctggaattg
ctggccttcgagtccgcccaggcgagattcgccgtggcctgcagcaaaggcacctacatc
cgtaccctggtcgaagacctcggccaggtgcttggatgcggggcgcacgtggcggaactg
cgtcgtacccaggcaggccccttctcgctggcccaggccatcaccctggatgagctggag
aaagcccacgccgaaggcggcaacgaggcactggaccggttcctcctgcccgaggacagc
ggcctggaacattggcccctggtccagttgagcgaacacagtgcctattactggctgcat
ggccagccggtaagggctcccgaggcgccgaagttcggcatgctgcgggtgcaggaccac
aacggtcgcttcatcggcatcggtgaagtgagcgatgacgggcgtgtagcgccgcgtcga
ctgattcggtcggaatga
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