Pseudomonas tohonis: TUM18999_59210
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Entry
TUM18999_59210 CDS
T07887
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
ptw
Pseudomonas tohonis
Pathway
ptw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
TUM18999_59210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptw02044
]
TUM18999_59210
Secretion system [BR:
ptw02044
]
Type VI secretion system
Imp/Vas secretion system core components
TUM18999_59210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
Motif
Other DBs
NCBI-ProteinID:
BCG27730
UniProt:
A0A6J4EDK9
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All DBs
Position
complement(6474298..6475218)
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AA seq
306 aa
AA seq
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MSVEHTSAAPRGATSFDESQGVYAALFSKINLSPISELSGLDAFQNNEALSEASADERVT
AAVSVFLDLLQQSAQKVERLDKTLLDEHIASLDAQISRQLDAVMHHEEFQRVESTWRGVK
SLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIAQSGLYVHTYTQEYDTPGGEPIAAAI
SNYEFDASPQDIALLRNLSKVAAAAHMPFIGAVGPAFFGKESMEEVAAIKDIGNYFDRAE
YIKWKSFRDSDDSRYIGLTLPRVLGRLPYGPDTIPVRNFNYVEKVKGPDHDRYLWTNASL
PSPRTW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaacacacctccgcagcccctcgtggggccacctcgttcgatgaaagccag
ggcgtctatgcggcgctgttcagcaagatcaacctcagcccgatcagcgagttgagcggc
ctggatgcattccagaacaacgaggcgctgtccgaagcgtccgctgacgagcgcgtcacg
gcggcggtcagcgtcttcctcgacctgctccagcagtcggcgcagaaggtcgagcgcctg
gacaagacgctgctcgacgagcacatcgcctcccttgacgcgcagatcagtcgccagctc
gacgcggtcatgcaccatgaggagttccagcgcgtggagtccacctggcgcggcgtgaaa
tcgctgatcgaccagacggacttccgccagaacgtccgcatcgaactgctcgacatcagc
aaggaccacctggtgcaggacttcgaggatgcgccggaaatcgcccagagcggcctctac
gtccacacctacacccaggaatacgacacccccggcggcgagccgatcgcggccgccatc
tccaactacgagttcgatgccagcccccaggacatcgccctgctgcgcaacctgtccaag
gtcgccgcagcggcgcacatgcccttcatcggcgccgtcggcccggccttcttcggcaag
gaatcgatggaggaagtcgccgccatcaaggacatcggcaactacttcgatcgggccgag
tacatcaagtggaaatccttccgcgacagcgacgactcccgctacatcggcctcaccctg
ccgcgcgtcctcggtcggctgccctatggcccggacaccatccccgtgcgcaacttcaac
tacgtggagaaggtgaaggggcccgaccacgaccgctacctgtggaccaacgcctcgttg
ccttcgccgcgaacatggtga
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