Pseudomonas tohonis: TUM18999_60800
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Entry
TUM18999_60800 CDS
T07887
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw03420
Nucleotide excision repair
ptw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM18999_60800 (uvrD)
03430 Mismatch repair
TUM18999_60800 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptw03400
]
TUM18999_60800 (uvrD)
Enzymes [BR:
ptw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM18999_60800 (uvrD)
DNA repair and recombination proteins [BR:
ptw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM18999_60800 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TUM18999_60800 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCG27889
UniProt:
A0A6J4EEW2
LinkDB
All DBs
Position
6716673..6718856
Genome browser
AA seq
727 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQAGGDLFLGTMLKIYEAYE
AACARTGVIDFSELLLRALDLWRDKPGLLAHYQRRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGARIENIQQFSSDFADAETIRLEQNYRSTAGILKAANALIA
NNQGRLGKELWTEGEDGEPLGLYAAFNEHDEARYVVESIESALKDGMARSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERVINVPARGI
GEKTVESIREFARAQDVSMWEAIRLLLANKGLPGRAAGALAVFIELIENLAAKVMEMPLH
LMTQTVIEQTGLITYHKEEKGEKGQARVENLEELVSAARAFENGEDDVELTPLQAFLSHA
SLEAGDTQADAFEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRL
AYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFVREIPPQLIREVRLGNSISRPVAGGA
RSGGSMFSGAEIPQTDFNLGQRVQHALFGEGTILNFEGSGAQARVQVKFESEGSKWLMLA
YAKLQAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctctcctcctgaactccctgaacgatgcccaacgccaggctgta
gccgcctcgctggggcgtcaactggtcctcgccggtgccggctcgggcaagacccgcgtg
ctggtgcaccgcatcgcctggctgatccaggtggagcaggcttcgccgcactcgatcctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcagctcctg
ggtatcaacccggcgggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgcgcgcactggcaggaagccggcctggccgagaacttccagatcctcgacagcgacgac
cagcagcgcctggtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggccg
gcacgccaggcgcagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcagcac
atccaggccggaggcgacctgttcctcggcaccatgctgaagatctacgaagcctacgag
gccgcctgcgcgcgcaccggggtcatcgacttctccgaactgctgctgcgcgccctcgac
ctgtggcgcgacaagcccggcctgctggcccactaccagcggcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcccag
ggcggcgacagcctcatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgcgcatcgagaacatccagcagttctccagcgacttcgccgacgccgagaccatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgccctgatcgcc
aacaaccaggggcgcctgggcaaggagctgtggacagaaggcgaggacggcgagccgctg
ggcctgtacgccgccttcaacgagcacgacgaagcccgctacgtggtggagagcatcgag
agcgcgctgaaggacggcatggcacgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaggaggcgctgctgcgggagaagatcccctaccgcatctatggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgctc
gacggccgtggcaacgacgccgccctggagcgggtgatcaacgtccccgcccggggcatc
ggcgagaagaccgtggaaagcatccgcgaattcgcccgcgcccaggacgtctccatgtgg
gaggcgatccgcctgctgctggccaacaagggcctgccgggccgcgccgccggtgccctg
gcggtgttcatcgagctgatcgagaacctcgccgccaaggtcatggagatgcccctgcac
ctgatgacccagaccgtcatcgagcagaccgggctgatcacctaccacaaggaagagaaa
ggcgagaaaggccaggcccgggtggagaacctcgaggaactggtcagcgccgcccgcgcc
ttcgagaacggcgaggacgacgtcgaactcaccccgctgcaggccttcctcagccatgcc
tcgctggaggccggcgatacccaggccgatgccttcgaggacagcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttccccctggtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaggagtccggccgcctggaagaggagcgccgcctg
gcctacgtcggcgtcacccgcgccatgcagcgcctggtgctgacctacgcggaaacccgc
cgcctctatggcagcgagacctacaacaaggtttcgcgcttcgtccgcgagattcccccg
caactgatccgcgaggtgcgccttggcaacagcatcagccgcccggtggccggcggtgcg
cgcagcggcggctcgatgttctccggcgcggagatcccgcagaccgacttcaacctcggc
cagcgggtgcagcacgcgctgttcggcgaaggcaccatcctcaacttcgagggctccggc
gcccaggcgcgggtgcaggtgaagttcgaaagcgaaggcagcaagtggctgatgctcgcc
tacgccaagctccaggccctctga
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