Pandoraea thiooxydans: ABW99_02540
Help
Entry
ABW99_02540 CDS
T03947
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_02540
Enzymes [BR:
ptx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABW99_02540
DNA repair and recombination proteins [BR:
ptx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABW99_02540
Prokaryotic type
ABW99_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKJ67273
UniProt:
A0A0G3EJQ5
LinkDB
All DBs
Position
complement(1347507..1348982)
Genome browser
AA seq
491 aa
AA seq
DB search
MSATSSPSPAIVWFRDDLRVADNPALHHAAASGRPLICVYVLDEQSDGLRPLGGAARWWL
HGALEALDASLSSLGGRLAILQGSAAQEIETLVAQTGAGAVYWNRRYGAAERALDSGLKK
NLEARGITVRSSNGQLLTEPWTVLNGAGQPFRVFTAYWRACSRQDEPAVPLSAPATLTFH
PWPGQMRTVSLASLRLEPHTPDWAGGLRRAWRRGEAAAHERLDDFLEDGLAGYANHRDLP
HVAGTSRLSPYLRFGHLSPRQIWHAAKAAMRAGTTRASQTDLDKLLAELGWREFSYHQLY
YFPDLARRNFQARFDAMPWRTDPAALRAWQQGRTGYPLVDAGMRELWTTGWMHNRVRMVC
ASFLAKHLLLDWRDGEAWFWDTLVDADPASNPSSWQWVAGSGVDAAPYFRIFNPVLQAEK
FDPQAVYVKRWVPELDGLPTSVVHHPWEASPAQREAAGLTLGQTYPAPIVAHQAARERAL
DALKLTTSPSP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaacgtcatcaccgtcacccgcgatcgtctggtttcgcgacgatctgcgcgtg
gcggacaatcccgccctgcatcacgctgccgcatcgggccgcccgctgatctgcgtctat
gtattggacgaacaaagcgacggtttgcgcccgcttggcggcgctgcgcgctggtggctg
cacggcgcgctcgaagcgctcgatgcgagtctgagctcgctcggcggacgcctggcgata
ttgcaaggctcagcggcacaagagatcgaaaccctggtggcgcaaacaggcgccggcgcc
gtttactggaatcgccgttacggcgcggccgagcgtgcgctcgacagcggcctgaaaaag
aatctggaagcacgcggcatcacggtgcgcagcagcaacggccaattgctgaccgagcca
tggacggtgctcaatggcgccgggcagccgtttcgcgttttcacggcctactggcgggca
tgctcccggcaggatgaaccggccgttccgttatcggcgcccgccaccctgacctttcat
ccttggcctgggcagatgcgcaccgtgtcgctggccagcttgcggctcgagccgcacaca
ccggactgggccgggggattgcgtcgcgcctggcggcgcggcgaggctgctgcgcacgaa
cggctcgatgacttcctggaagatggattggcaggctatgccaaccaccgcgacctgccg
catgtggccggcacgagccgactgtcgccgtatttgcgctttggccatctgtcgccccgt
caaatctggcacgcagccaaggcggcgatgcgcgccgggacgacacgcgcgagccagacc
gatctggacaagctgcttgccgaactcggctggcgcgaattctcgtatcaccagctttat
tatttccccgatctggcgcgccgcaattttcaagcgcgtttcgatgcgatgccctggcgt
accgacccggctgcattgcgggcctggcagcagggtcgcaccggctatccgttggtggat
gccggcatgcgcgaactgtggaccaccgggtggatgcacaaccgcgtgcgcatggtgtgc
gcgtcgtttcttgccaagcatctgctgctcgactggcgcgacggagaggcgtggttctgg
gatacgctggtggatgccgatccggccagcaatccgtcgagttggcaatgggtggcgggc
tccggcgtcgacgcggcgccgtatttccgcattttcaatccggtgctgcaagcggagaaa
ttcgatccgcaggcggtgtatgtgaaacgctgggtgccggagttggacggcttaccgacc
tctgtcgtgcatcatccgtgggaggcttcgccagcgcagcgcgaagcagccgggttgacg
ctcggccagacctaccccgcgccaatcgtggcgcatcaggcagcgcgcgagcgcgctctg
gatgcgctcaagctgacgacaagcccttctccgtaa
DBGET
integrated database retrieval system
