Pandoraea thiooxydans: ABW99_05645
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Entry
ABW99_05645 CDS
T03947
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABW99_05645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_05645
Enzymes [BR:
ptx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
ABW99_05645
DNA repair and recombination proteins [BR:
ptx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABW99_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKJ70394
UniProt:
A0A0G3EWM6
LinkDB
All DBs
Position
complement(2028341..2028874)
Genome browser
AA seq
177 aa
AA seq
DB search
MADPTDSTQALPDILAPGLSVVFCGINPSLGAASTGHHFANGRNRFWRAIHLAGFSPGQI
RPEDDRTLLQYGCGLTTALARPTARARELSREELAAAAVALERKIELYAPCCLAFLGKMA
LAAMTGAQHLAWGPQASPFGGAHTWVLPNPSGLNRAFNLDSLVIAYRELRAAVASIS
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaccccaccgattcgactcaagcgctgcccgatattctcgcgccgggcttgtcg
gtggtcttttgcggcatcaatccgagcctcggcgcagcttcgacgggccatcacttcgcc
aatggccgcaaccgattctggcgggccattcacctggcgggtttttctcccgggcagatt
cgcccggaagacgaccgcacgctgcttcaatacggttgcggcctgacaactgcgctggcg
cgcccaaccgcgcgcgcccgcgagctctcgcgcgaggagcttgcggccgccgctgtcgcc
ctcgagcgaaagatcgaactgtacgcgccttgctgcctggccttccttggcaagatggca
ctagctgccatgaccggcgcgcagcatctcgcgtgggggccgcaagccagcccgttcggg
ggcgcacacacctgggtcctgccgaacccaagcggcctgaaccgtgccttcaatctcgat
tccctggtgattgcctatagggaacttcgcgcggccgttgcttcgatatcctga
DBGET
integrated database retrieval system
