KEGG   Pandoraea thiooxydans: ABW99_06235
Entry
ABW99_06235       CDS       T03947                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
ptx  Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:ptx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptx03032]
    ABW99_06235
   03036 Chromosome and associated proteins [BR:ptx03036]
    ABW99_06235
   03400 DNA repair and recombination proteins [BR:ptx03400]
    ABW99_06235
DNA replication proteins [BR:ptx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ABW99_06235
Chromosome and associated proteins [BR:ptx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ABW99_06235
DNA repair and recombination proteins [BR:ptx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ABW99_06235
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 DUF7342
Other DBs
NCBI-ProteinID: AKJ67873
UniProt: A0A0G3ELD6
LinkDB
Position
2152175..2152447
AA seq 90 aa
MNKTELIDHIADKADISKAAAGRALDALVGAVKTTLKKGGSVTLVGFGTFAVGKRAARTG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaaccgaactgatcgaccatatcgcggacaaagcagacatttcgaaagcagcc
gcaggtcgtgcgctcgacgctttggtaggtgcagtgaaaacgacgctgaaaaaaggtggc
agtgtgacgctcgtgggattcggcacgtttgctgtcggcaagcgcgccgcccgcacaggt
cgcaacccccgcacaggcgcggcaatcaaaatcaaggcggcaaaggtaccgaaatttcgc
cctggcaaagccctgaaagatgcgttaaactga

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