Pandoraea thiooxydans: ABW99_08795
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Entry
ABW99_08795 CDS
T03947
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptx03016
]
ABW99_08795
Enzymes [BR:
ptx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABW99_08795
Transfer RNA biogenesis [BR:
ptx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABW99_08795
Prokaryotic type
ABW99_08795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKJ70473
UniProt:
A0A0G3ETV1
LinkDB
All DBs
Position
complement(2707893..2708873)
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AA seq
326 aa
AA seq
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MPDLKSNVERRRPPRLPLNGVLLLDKPLGLSSNDALMRAKRLLNAQKAGHTGTLDPLATG
LLPLCFGEATKFAQDLLDADKTYLASVRLGVCTTTGDAEGEVVSERPVNVGSDDVEAILP
RFTGAIDQVPPMYSALKRDGKPLYEYARAGQVLAREPRRVTIHQLELIDSQLPDAPMLTL
RVRCSKGTYVRTLAEDIGEALGCGAHLTGLRRIGVGALSLDGAVTLEDLEALDEGQRAAR
LAPLDALLQALPSLTLSDDLARRFCHGQRLRLDDTAEPSLSQTAGSAQTLIRVYGRLDPE
RKPALLGVATRSADGLLVPRRLVAQN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctcaaatcaaacgtagaacgtagacgtccgcccagattgcctctgaacggc
gtattgctgctcgataaaccgcttggactgtcatcgaacgatgcgttgatgcgcgccaag
cggcttctcaacgcgcagaaggccggccataccggcacgcttgatcctttggccactggg
ctcttgccgctgtgctttggagaagccactaaattcgctcaggatttgctcgatgccgac
aagacgtatctggccagcgtgaggctcggcgtgtgcacgacgacgggcgatgcggaaggc
gaggtggtgtccgagcgtcccgttaatgtcggttcggacgacgtcgaagcgatcttgccc
cggtttaccggcgcaatcgatcaggttccgccgatgtactcggcactcaagcgcgatggc
aagcccctctacgagtatgcgcgagccggacaagtgctcgcgcgcgagccgcggcgcgtg
acgattcatcaactcgaattgatcgacagtcaacttcctgacgcgccaatgctcaccttg
cgtgtgcgttgcagcaagggtacctacgtgcgtacccttgctgaggatattggtgaggcg
ttagggtgcggcgcccatttgacggggctgcgccgcattggtgtcggcgcgctgagcctg
gatggagccgtaacgctcgaagacctggaagcgttggacgaagggcagcgtgcggcgcga
ttggcaccgctcgatgcgttgctccaggcgttgccgagcttgacgctttcggacgatctg
gcgcgtcgcttttgccacgggcagcggctgagactggacgacactgcggagccgtcgctt
tcacagactgccggctcggctcagacgttgataagggtctacggccgcctcgaccccgag
cgaaagccggcgcttctcggtgttgcaacacgcagcgcggatggcttgctggtgcctcgc
cggcttgtcgcgcaaaactga
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