Pandoraea thiooxydans: ABW99_09795
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Entry
ABW99_09795 CDS
T03947
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptx03021
]
ABW99_09795
Transcription machinery [BR:
ptx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABW99_09795
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AKJ68464
UniProt:
A0A0G3ER30
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All DBs
Position
complement(2937618..2938688)
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AA seq
356 aa
AA seq
DB search
MLKKKRHLSHHGENSELAADEAGEQSERHDAPADDPFVEGDGESSEPGEARELDAPQAAA
AEPDEFTTILQAELTADTVQHYLNRISIKPLLTPAEELHYATLAQGGEFGARQVMIERNL
RLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPGRGFRFSTYATWWIRQSIERAIM
NQARTVRLPVHVIRELNQVLRAKRHLEKSAPYVDGAERRDASIDDIADLTGKTADEIIDI
LALNEHVASLDAPLEIDPGSSLLDLLSDDHSQAPEQEVQHRELEDLMRLWLSRLSTKHRY
VIERRFGLNRIEPATLEELADEMGLTRERVRQIQQEALVKLKRYFASNGVRKDSVL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagaagcgtcatctctcgcatcacggagaaaactccgagctcgccgccgac
gaggctggcgagcagtcggaacgccacgacgcgccggccgacgacccgttcgtcgaaggc
gacggcgagtccagcgagccgggcgaggcgcgcgaactcgacgcaccgcaggccgctgcg
gccgagcccgacgagttcaccaccatcctgcaggccgaactcacggccgacacggttcag
cactacctgaaccgcatcagcatcaagccgcttctcacgcccgccgaagaacttcattac
gcgacgcttgcccagggcggcgaattcggtgcgcggcaggtcatgatcgagcgcaacctg
cgcctggtggtgagcatcgccaagggttacctcaatcgcggcgtgccgctgctcgacctg
atcgaagagggcaacctcgggctgatgcatgccatcgaaaaattcgatccgggccgggga
ttccgcttttcgacctacgcgacctggtggatccggcaaagcatcgagcgcgccatcatg
aaccaggcgcgcaccgtgcgcctgccggtgcacgtgatccgcgagctcaatcaggtgctg
cgcgccaagcggcacctggagaaaagcgcgccatacgtcgacggcgccgaacggcgcgat
gccagcatcgacgacattgccgacctgacgggcaagacggccgatgaaatcatcgacatc
ctcgcgctcaacgaacacgtcgcctcgctcgacgcgccgctcgaaatcgaccctggcagc
agcctgctcgatctgctctccgacgaccacagccaggcgccggagcaggaagtgcagcac
cgggagctcgaagacctgatgcgtctttggctctcgcgtctttccaccaagcaccgctat
gtgatcgagcgtcgcttcgggctcaaccggatcgagccggccacgctcgaggaactggcc
gacgagatgggcctcacgcgcgagcgggtcaggcaaatccagcaggaagccctggtcaag
ctcaaacgttatttcgcctccaacggcgtgcgcaaggattccgtattgtga
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