Pandoraea thiooxydans: ABW99_10585
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Entry
ABW99_10585 CDS
T03947
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx03030
DNA replication
ptx03410
Base excision repair
ptx03420
Nucleotide excision repair
ptx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABW99_10585
03410 Base excision repair
ABW99_10585
03420 Nucleotide excision repair
ABW99_10585
03440 Homologous recombination
ABW99_10585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptx03032
]
ABW99_10585
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_10585
Enzymes [BR:
ptx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABW99_10585
DNA replication proteins [BR:
ptx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABW99_10585
DNA repair and recombination proteins [BR:
ptx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABW99_10585
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABW99_10585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AKJ68592
UniProt:
A0A0G3ETD4
LinkDB
All DBs
Position
complement(3102435..3105188)
Genome browser
AA seq
917 aa
AA seq
DB search
MSEQNYLKGKTLLLVDGSSYLYRAYHALPDLRGPTGEPTGAVYGIVNMLRRLRKDVHAEY
SACVFDAKGKTFRDDWYPQYKANRPSMPEDLARQIEPIHEAVRALGWPLLMIDGVEADDV
IGTLARRAAAAGMRVVISTGDKDLAQLVDDQVTLVNTMSNETLDPAGVSAKFGVPPELIV
DYLTLMGDTVDNVPGVAKVGPKTAAKWLGQYGTLDNLIAHAEEIKGAVGNNLREALSWLP
MGRKLVTVVTDCDLDPHVESIEASLPAQPEQRDQLRSFFKRHGFKTWLREVEAGDADDGE
SDADVGASPSEGRGELPRDYEMVVDWQTFDAWLQKIEAAELTAFDTETTSLDAMQAQIVG
LSVSVAPGHAAYVPLAHRAPGAQTQLPRDEVLARLKPWLESEAHKKVGQHLKYDTHVLAN
RGIALRGVAHDTLLESYVLESHRSHDMDSLAERHLGVKTIKYEEVCGKGAGQIGFDEVPI
ERATEYAAEDADITLRLHYALYPDIERSEGLRYVYEKIELPVARVLGIIERNGVLIDSAL
LVKQSHELGTRMIELEAEAHKLAGQPFNLNSPKQIGEIFFQQLKLPVVKKTASGAPSTDE
EVLQKLAEDYPLPKVLLDYRGLSKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTGEGRRIREAFIAPPGRSIVSADYSQIELRIMAHISGDERLTRAFTDGE
DIHRATAAEIFGVSPQDVSSEQRRHAKVVNFGLIYGMSAFGLASSLGIERDAAKHYIDRY
FMRYPGVANYMEQTRKSAKEHGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVQDWLEQDRLGTLMIMQVHDELVLEVLDTELAVVREKLPELMCSVAKLR
VPLVAEVGVGRNWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaaaactacctgaaaggtaagactctcttattggtcgatggttcgagttat
ctctatcgagcctaccacgcccttcctgatttgcgaggcccgaccggggagccgactggc
gccgtctacggcatcgtgaatatgttgcggcgcttgcgcaaggacgttcatgcagagtat
agcgcttgtgtgttcgacgccaagggcaagactttccgggatgactggtatccgcagtac
aaggccaaccggccttcgatgcccgaggatctggcgcgtcagatcgagccgatccacgag
gccgtgcgagccctgggctggccgctgctgatgatcgacggcgtggaggccgacgacgtg
atcggcacactggcccggcgggctgcggccgctggcatgcgtgtggtcatttcgaccggc
gacaaggacctggcacaactggtggatgatcaggtcacgctggtcaacacgatgagcaac
gagacgctcgatcccgctggcgtgagtgccaaattcggcgtgccgccagagctcattgtc
gattatttgacgctgatgggagacaccgtggacaacgtgcccggggtggcgaaagtcggg
ccgaagaccgcggccaagtggctgggccaatacggcacgctggacaacctgatcgcccat
gccgaggagatcaagggcgcggtcggcaacaatcttcgcgaggcgctgtcgtggctgccg
atggggcgcaagctggtaaccgtggtgacggattgtgatctggatccgcatgtggaatcc
atcgaagcttcgctgcccgcgcaacccgagcaacgtgaccagttgcgatcgtttttcaag
cgccacggcttcaaaacctggttgcgcgaagtcgaggcgggcgacgccgatgacggcgag
agtgacgcggatgtcggcgcgagtccgagcgaggggcgcggggagctgccgcgcgattac
gagatggtggtcgactggcagactttcgatgcgtggctgcaaaagatcgaagccgccgag
ttgacggcattcgataccgaaaccacttcactggacgccatgcaggcgcagatcgtcggg
ctgtcggtatcggtggcgccggggcatgccgcttacgtgccgctcgcgcaccgcgcgccc
ggggctcaaacgcaactgccgcgagacgaagtgctggcccggctcaagccctggctggag
agcgaggcgcacaaaaaagtagggcagcatttgaagtatgacacccacgttctggccaat
cgcggcatcgcgctgcgcggcgtggcgcacgatacgctgctcgaatcctacgtgctggag
tcgcatcgctcgcacgatatggatagcctggccgagcgccacctgggcgtcaagacgatc
aaatatgaagaggtgtgcggcaagggcgccggccaaatcggcttcgacgaggtgcccatc
gagcgcgcgaccgaatacgcggccgaggacgccgatatcacattgcggctgcattacgcg
ctctatcccgacatcgagcgctcggagggactacgctacgtctacgaaaagatcgagctg
ccggtggcacgcgtgctcggcatcatcgagcgcaacggcgtgctgatcgacagcgcgctg
ctcgtcaagcaaagccatgaactcggcacccggatgatcgagctcgaagccgaagcgcat
aagctggccggacaaccattcaacctgaactcgcccaagcagatcggcgagatattcttc
cagcaactcaagttgccggtggtgaaaaagaccgccagcggcgctccctcgaccgacgaa
gaagtgctgcagaagctggccgaggattatccgttgcccaaagtgctgctcgactatcgc
ggcctgtccaagctgaagtcgacctacacggacaaattgcccaagatggtgaatcctgcc
accggccgcgtccacaccaattatgcgcaggccgtggcggtgaccggccgtctggcgtcg
aacgatcccaacctgcagaacattccggtgcgcaccggcgagggccgcaggattcgcgag
gcgttcattgcgccgcccgggcgcagcatcgtgtcggcggattactcgcaaatcgagctg
cgcatcatggcgcatatttcaggcgacgagcgcctcacacgggcgttcaccgacggcgaa
gacattcaccgagccaccgccgcggagatttttggcgtgagcccgcaggacgtgtcgagc
gagcagcgccgccatgccaaggtggtcaatttcggcttgatctacggcatgagcgcgttt
ggcctggcctccagcctcggcatcgaacgcgacgccgccaagcattacatcgatcgctat
ttcatgcgctatcccggtgttgccaactatatggagcagacccgcaagagcgccaaggag
cacggttacgtcgaaaccgtctttggtcgccgcctgtggttgccggagatcaacggcggc
aacggtccgcgccggcaggcggcggagcgcgcggcgatcaacgcgccgatgcagggaacc
gcggcggatctgataaaactatcgatgatcgcggtgcaggactggctcgaacaggaccga
ctgggcacgctgatgatcatgcaggtccatgacgaactggtgttggaagtcctggatacg
gaattggccgtagtgcgcgaaaaactgccggaactcatgtgctcggtggcgaaactcagg
gtgccgctggtcgcggaagtgggcgtgggccggaactgggaagaggcccattga
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