Pandoraea thiooxydans: ABW99_11450
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Entry
ABW99_11450 CDS
T03947
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx03030
DNA replication
ptx03430
Mismatch repair
ptx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABW99_11450
03430 Mismatch repair
ABW99_11450
03440 Homologous recombination
ABW99_11450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptx03032
]
ABW99_11450
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_11450
Enzymes [BR:
ptx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABW99_11450
DNA replication proteins [BR:
ptx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABW99_11450
DNA repair and recombination proteins [BR:
ptx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABW99_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKJ68740
UniProt:
A0A0G3EP14
LinkDB
All DBs
Position
3291937..3292674
Genome browser
AA seq
245 aa
AA seq
DB search
MRQLVVDTETTGLNPKTGDRILEIGCVELVNRRLTGRNLHYYINPERDSDPGALAVHGLT
TEFLSDKPKFAEVVDELRDYIAGAEIIIHNAAFDLGFFDAEFERLGLPSFMSHCDGLIDT
LLQAREMFPGRRNSLDALCERLGVSNAHRTLHGALLDAELLAEVYLAMTRGQESLVIDLM
DASADSGESDNSCVALHQIELPVLAASGEEQALHDGLLDELDKSVKGTCVWRETPAAGPE
AGTPS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcgtcgtcgacaccgaaaccaccggactgaaccccaagaccggcgaccgc
atcctcgaaatcggctgcgtcgaactcgtcaaccgtcgcctcaccgggcgcaacctgcac
tactacatcaatcccgaacgcgacagcgacccgggcgcgttggccgtgcacggcctgacc
accgagtttctcagcgacaaacccaaattcgccgaagtcgtcgacgaattgcgcgactac
atcgccggcgccgaaatcatcattcacaacgcggccttcgacctcggctttttcgacgcc
gaattcgagcggctcggcctgccaagcttcatgagccattgcgacggcctgatcgacacg
ctgctgcaagcccgcgaaatgttccccggcaggcgcaactctctcgacgccctgtgcgag
cgcctgggcgtgagcaacgcccaccgcacgttgcacggcgcgctgctcgatgccgagctg
ctcgccgaggtctatctggccatgacgcgcggccaggaaagcctggtgatcgatctgatg
gatgcttccgccgacagcggcgagtccgacaactcctgcgtcgcgctgcatcagatcgaa
ctgcccgtgctggccgccagcggcgaagagcaagccctgcacgacggactgctcgacgaa
ctcgataaaagcgtcaagggcacctgcgtctggcgcgagacccctgctgccggcccggag
gccggcaccccgtcctga
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