Pandoraea thiooxydans: ABW99_13835
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Entry
ABW99_13835 CDS
T03947
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABW99_13835
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptx01007
]
ABW99_13835
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptx03016
]
ABW99_13835
03029 Mitochondrial biogenesis [BR:
ptx03029
]
ABW99_13835
Enzymes [BR:
ptx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
ABW99_13835
Amino acid related enzymes [BR:
ptx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABW99_13835
Transfer RNA biogenesis [BR:
ptx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABW99_13835
Prokaryotic type
Other AARSs
ABW99_13835
Mitochondrial biogenesis [BR:
ptx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ABW99_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AKJ69127
UniProt:
A0A0G3EUW4
LinkDB
All DBs
Position
complement(3827656..3829458)
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AA seq
600 aa
AA seq
DB search
MSMRTSYCGLVTEQQLGQTVKLCGWVQRRRDHGGVIFIDLRDREGLVQIVCDPDRPEMFK
AAESVRNEFCLQIVGLVRARPAGTENANLTSGKIEVLCHELNVLNASVTPPFQLDDENLS
ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEARRYLDEQGFIDIETPMLTKSTPEGARDYL
VPSRVNPGHFFALPQSPQLFKQLLMVAGFDRYYQVTKCFRDEDLRADRQPEFTQIDCETA
FLDEQEIRDLFENMIRRVFKNTIDVELAAQFPVMQHSEAMRRYGSDKPDLRVKLEFTELT
DVMADVDFKVFSTPATTEGGRVVALRVPHGAELSRSEIDSYTEFVKIYGAKGLAWIKVND
VSKGRDGLQSPIVKNLHDAAISAILERTGAQGGDIIFFGADKAKIVNDAIGALRLKVGHS
EFGRSNGLFEAGWQPLWVVDFPMFEYDEEDARWVASHHPFTSPKDEHIAYLESDPGKCLA
KAYDMVLNGWEIGGGSVRIFQEAVQSQVFRALKISDDEARAKFGFLLDALQYGAPPHGGI
AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQAESPKV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgaacttcttactgtggtctggtgaccgagcagcagctcggtcaaaccgtc
aaactgtgcggctgggtgcagcgccgccgcgatcacggtggggtcattttcattgatttg
cgcgaccgcgaaggcctggtgcaaatcgtctgcgacccggatcgcccggagatgttcaag
gcggccgagagcgtgcgcaacgagttctgcctgcagatcgtcggtctggtgcgagcccgt
ccggccggcaccgagaacgccaatctgaccagcggcaagatcgaggtgctttgccatgag
ctcaacgtgctcaacgcatcggtgacgccgccgttccagctcgacgacgagaacctgtcg
gagaccacccgcctcacgcatcgcgtgctcgatctgcggcgcccgcagatgcagtacaac
ctgcgcctgcgctacaaggtggccatggaagcgcgccgatacctcgatgagcagggcttt
atcgacatcgaaacgccgatgctcaccaagagcacgccggaaggcgcgcgcgactatctg
gtgccttcgcgtgtcaaccccggccatttcttcgcgctgccgcagtcgccgcagctgttc
aagcaactgttgatggtggcggggttcgatcgctattaccaggtgaccaagtgcttccgc
gacgaagatctgcgtgccgaccgccagcccgaattcacccagatcgattgcgagacggcg
ttcctcgacgaacaggaaattcgcgatctgttcgaaaacatgatccgtcgcgtattcaag
aacaccatcgatgtcgaactcgcggcgcagttcccggtgatgcagcatagcgaagccatg
cgccgctatggctcggacaagcccgacttgcgcgtcaagctggaattcaccgagctgacc
gacgtgatggctgacgtcgacttcaaggtgttttcgaccccggcgacgaccgagggcggg
cgcgtggtcgcgctgcgcgtgccgcacggcgccgagttgtcgcgcagcgagatcgacagc
tataccgaattcgtgaagatttatggcgccaaggggctggcgtggatcaaggtcaacgac
gtcagcaaggggcgcgacggcctgcaaagcccgatcgtcaagaatctgcatgacgcagcg
atctcggcaattctggagcgcaccggcgcgcagggcggcgacattattttcttcggcgcc
gacaaggccaagatcgtcaacgatgcgatcggcgcgttgcgtctcaaggtcgggcactcc
gaatttggccgcagcaatggcctgttcgaagccggttggcagccgctgtgggtcgtcgat
tttccgatgttcgaatacgacgaagaagatgcccgctgggtggcgagccaccatccgttc
accagcccgaaggacgagcatatcgcttatctggagtccgaccccggcaagtgtttggcc
aaggcctacgacatggtgctcaacggctgggaaatcggcggcgggtcggtgcggatcttc
caggaggccgtgcaaagccaggtcttccgggctctcaagatcagcgacgacgaggcccgc
gcgaagtttggtttcctgctcgatgcgctgcaatatggcgcgccgccgcatggtggtatc
gccttcggcctcgatcgcatcgtgaccatgatggccggcgccgattcgattcgcgatgtc
attgcgttcccgaagacccagcgtgctcaatgtttgctcacgcaggcgccgtcgccggtc
gacgagcggcagttgcgcgaactgcatatccgtctgcggcaagccgaatcgcccaaggtt
tga
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