Pandoraea thiooxydans: ABW99_15165
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Entry
ABW99_15165 CDS
T03947
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx00100
Steroid biosynthesis
ptx00909
Sesquiterpenoid and triterpenoid biosynthesis
ptx01100
Metabolic pathways
ptx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
ABW99_15165
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
ABW99_15165
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ptx01006
]
ABW99_15165
Enzymes [BR:
ptx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
ABW99_15165
Prenyltransferases [BR:
ptx01006
]
Terpene biosynthesis
Squalene/phytoene synthase
ABW99_15165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AKJ70614
UniProt:
A0A0G3EX53
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All DBs
Position
complement(4099821..4100882)
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AA seq
353 aa
AA seq
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MPTPNRAFLLGPLLKRVSRSFYLTLRVLPAGMRDPVGLAYLLARAADTIADTTLIAPEQR
LQLLLALRAQVDGADDGGAFARRLAADVAPRQVSDEKVLLESLGCALAVLAQLSEADRAA
VRDIVSTLSTGMEFDLRTFPDEHSGRIAALRDDEELDRYTYLVAGCVGEFWTRMTDAHVP
GTFGGEQASIMSRGIRFGKALQMTNILRDCGKDLRIGRCYLPATMLAHEGLTPAELLLPD
ASQRARPLLRELVERTLAHFRAAVDYMLAIPPTSLRLRLACAWPILIGLETLRLLVNNDA
WLDPARVSKLPRGRVYRIVAYSSLAAPSNRLLRGWAERLIAEIGACLEARAID
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgcccaaccgcgcttttcttctcggcccgctgctcaagcgggtttcccgctcc
ttttatctgactttgcgcgtgctgcccgccggcatgcgtgacccggtcggcctggcttat
ctgctggcgcgcgcggccgacaccatcgccgataccacgctgatcgcgcccgagcagcgc
ctgcagctgttgttggcgctgcgcgcccaggtcgacggcgcggacgacggcggggccttc
gcgcgccgtcttgcggcggatgtggcaccgcgccaggtatcggacgaaaaggtcttgctg
gagtcgctcggctgcgcattggcagtcctggcgcagttgagcgaagcggatcgcgcggca
gtgcgcgatatcgtgtcgaccctgagcaccggcatggaattcgacctccgaacctttccc
gacgagcattcggggcgcatcgcggctctgcgcgatgacgaggagctcgaccgctatacc
tacctcgtggccggatgcgtgggcgagttctggacccggatgaccgatgcgcacgtgcct
ggcaccttcggcggcgagcaggcgtcgatcatgtcgcgtggcatccggttcggcaaggcg
ctgcaaatgaccaatatcctgcgcgactgcggcaaggatctgcgcatcggccgctgttac
cttcccgccacgatgctggcgcacgagggtttgacgccggccgaactgctgttgccggat
gcctcccagcgcgcgcgcccgctgctgcgcgagctcgtcgaacggacattggcgcatttc
cgcgccgccgtcgactatatgctggcgattccgcccacctcgctgcgcttgcggctggcc
tgcgcctggccgatcctgattggcctggaaacactgcgcctgctggtgaacaacgatgcc
tggctggacccggcgcgcgtctccaagctgccgcgcggcagggtgtaccgcatcgtcgcg
tattcgagcctggcggcgccgtcgaatcggctgctgcgcggctgggccgagcggctgatt
gccgagatcggcgcctgcctggaagcgcgcgccatcgattga
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