Pandoraea thiooxydans: ABW99_15980
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Entry
ABW99_15980 CDS
T03947
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ptx
Pandoraea thiooxydans
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptx01011
]
ABW99_15980
Enzymes [BR:
ptx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABW99_15980
Peptidoglycan biosynthesis and degradation proteins [BR:
ptx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABW99_15980
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_19
PknG_TPR
TPR_14
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AKJ69489
UniProt:
A0A0G3EU06
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All DBs
Position
complement(4264671..4266659)
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AA seq
662 aa
AA seq
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MSKRLTRVYRVVAAFLTAASLVACTTTGAASHFRHARLERHTAIPQTPDEIFVALRNAAL
DNDAARAAELASQLPNYPIPSYVEYFQIRPQMFDSQGKALVDAPDDVIRAFLSKYRGRAI
ADRLRNDWLLVLGKRHDWKTFDAQYAKFVLNDDTQVKCYALMSRASRGEQVGVLARDLLV
HPRYFGEGCVDMINMLAQMKQLTPDDVWFQIRQAYESNYVTLGKQIADALGDQRPDDALL
DMAANRPTQLLARGIQDTDASRQLALLAITRMARNSPALASASLGEISAYLSPQERQAGW
GEIGYQAALELDPQALDWYRRSGDVRLSFPAQQWKVRAALRAGDWTAVRSAIEQLAPELR
GDSVWIYWYGRALSATGQPEAARKQFERISNQYNFYGQLALEALGGKITIPPRTTVTPAE
VDAMRNVPGFLRAEKLYALNLRLEGNREWNWELRRMDDSQLLAAAEYAKSIELYDRAVNT
ADRTRTEQDFTLRYLMPFRSAMERNAAAVDLDPAWAYGLIRQESRFIINASSTVGASGLM
QLMPGTARLVARKIGIDYNPSAIHDINTNLLLGTNYLSMIYNQFDGSAVLASAGYNAGPR
RPLNWRATLTRPVEGAIFAETIPFNETRIYVENVLSNTTYYAALISGKPQSLKARLGTVF
PQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtttgacccgagtatatcgcgtagttgcggcctttttgacagccgccagt
ctggtggcctgcaccaccaccggcgcggcaagccacttccgtcacgcccggctcgagcgg
cacacggcaatcccgcaaacccccgatgagattttcgtcgcgctgcgcaatgcggcgctc
gataacgatgcggcgcgcgcggccgaattggcctcgcagctccccaattacccgattccc
tcctacgtcgaatatttccagatccggccgcagatgttcgactcgcagggcaaggcgctg
gtcgacgcgcccgacgacgtcatccgcgccttcctgagcaaatatcgcggccgggcgatc
gccgaccgcctgcgcaacgactggctgctggtgctgggcaagcggcacgactggaaaacc
ttcgacgcccagtatgccaagttcgtgctcaacgacgatacccaggtcaagtgctatgcg
ctgatgtcgcgcgccagccgtggcgagcaggtgggtgtcctggcgcgcgacctgctggtg
catccgcgctacttcggcgaaggctgcgtcgacatgatcaacatgctcgcgcagatgaag
cagctcacgcctgacgacgtctggttccagattcgccaggcctacgagagcaattacgtg
acgctgggcaagcagatcgccgacgcgctgggcgaccagcggcccgacgacgcgctgctc
gatatggcggcgaatcggcccacccagttgctcgcgcgcggcatccaggataccgacgca
tcgcggcaactggcgctgctggccattacccgcatggcgcgcaacagccctgcgctggct
tcggcctcgcttggcgagatttccgcctatctgtcgccgcaggagcggcaggcgggctgg
ggcgagatcggctatcaggcggcgctggaattggatccgcaggcgctggactggtatcgc
cgcagcggcgacgtgcgcctgtcgttcccggcccagcaatggaaggtgcgcgcggccctg
cgcgcgggcgactggacggcggtgcgcagcgccatcgagcagttggccccggagctgcgc
ggcgattcggtctggatttattggtacggccgcgccctgagcgcgacgggccaacccgag
gcggcgcgcaagcaattcgagcgcatcagcaatcagtacaacttctacgggcaattggcg
ctcgaggcgctgggcggcaagatcacgattccgccgcgcaccaccgtcacgccggccgaa
gtcgatgcgatgcgcaacgtgcccggttttctgcgcgcggaaaagctctatgcgctgaat
ttgcgcctggaaggcaaccgcgagtggaattgggaactgcgccgcatggatgacagccaa
ctgctcgcggcggccgaatacgccaagagcatcgagctgtacgatcgcgcggtcaacacc
gccgaccgcacccgcaccgagcaggatttcacgctgcgctacctgatgccgtttcgcagt
gcgatggagcgcaatgccgcggcggtcgacctcgacccggcctgggcttatgggctgatc
cgccaggagtcgcgcttcatcatcaatgccagttcaaccgtcggcgcctcggggttgatg
caactgatgccgggcaccgcccgactggttgcccgcaaaatcggcatcgactacaacccc
tcggcgattcacgacatcaatacgaatctgctgctgggtacaaattacctgtcgatgatc
tacaatcaattcgacggctcggcggtgctggcatcggctggctacaacgccggccccagg
cggccgctcaattggcgagccacgctgacacggccggtcgagggggccatcttcgccgag
acgattccgttcaacgagacgcgcatctatgtggagaacgttttgtcgaacacgacttac
tatgctgccctgatcagcggcaagccgcagtcgctcaaggcgcggctggggaccgtcttc
ccgcagtaa
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