Pandoraea thiooxydans: ABW99_16270
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Entry
ABW99_16270 CDS
T03947
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx00300
Lysine biosynthesis
ptx00470
D-Amino acid metabolism
ptx01100
Metabolic pathways
ptx01110
Biosynthesis of secondary metabolites
ptx01120
Microbial metabolism in diverse environments
ptx01230
Biosynthesis of amino acids
Module
ptx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABW99_16270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABW99_16270
Enzymes [BR:
ptx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABW99_16270
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Waikav_capsid_1
Motif
Other DBs
NCBI-ProteinID:
AKJ69535
UniProt:
A0A0G3ERF2
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Position
complement(4318731..4319579)
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AA seq
282 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGIHQQVDLSAEQWRALADRHFGVGADQLLVVEKPTIDGVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDHQLTDQRSVRVQVQQGILTLTMHEDGQVSVDM
GRPELSPAKVPFDAHGLTGRPEHDDLLWPLEVDGKTVWISVVSMGNPHAVQTVDDVERFP
VAHDGPLIERHARFPNRVNAGFMQVLDRHTIRLRVYERGAGETLACGTGACAAVVAGIRR
GLLDTPVAVHTHGGILSIAWDGAGAVVMTGAATTVFEGEIEL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaaaatgcacggcgccggcaacgactttgtcgtgctcgacggc
atccatcaacaggtagacctgagtgccgagcaatggcgcgcgctggccgaccgccacttc
ggtgtgggcgcggaccagctcctggtggtcgagaagccgaccatcgatggcgtcgatttc
cgctaccggattttcaatgcggacggtggcgaggtcgagcattgcggcaatggcgcgcgc
tgcttcgtcaaattcgtgcgcgaccatcagctgaccgaccagcgcagcgtgcgcgtacag
gtgcaacagggcattctcaccctgaccatgcatgaggacgggcaagtctcggtcgatatg
ggccggccagaactgtcgccggccaaggtgccattcgacgcgcacgggctcaccggccgg
ccggagcatgacgatctgctatggccgctcgaggtcgacggcaagaccgtctggatctcc
gtggtgtcgatgggcaaccctcacgcggtgcaaacggtcgatgacgtcgagcggttcccg
gtggcgcacgatggcccgctcatcgagcgtcatgcgcgctttccgaaccgggtcaatgcc
gggttcatgcaagtgctcgatcgtcacacgatcaggttgcgcgtctacgagcggggcgcc
ggcgagacgctcgcttgcggcacgggcgcatgcgcggcggtggtggccggcattcgccgc
ggtttgctcgataccccggtagcagtgcatacgcacggcggcatcctgtcgatcgcctgg
gacggtgccggcgctgtcgtcatgaccggcgcggcaaccaccgtgttcgaaggcgaaatc
gaactgtaa
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