Pandoraea thiooxydans: ABW99_18220
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Entry
ABW99_18220 CDS
T03947
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx00300
Lysine biosynthesis
ptx00470
D-Amino acid metabolism
ptx01100
Metabolic pathways
ptx01110
Biosynthesis of secondary metabolites
ptx01120
Microbial metabolism in diverse environments
ptx01230
Biosynthesis of amino acids
Module
ptx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABW99_18220
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABW99_18220
Enzymes [BR:
ptx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABW99_18220
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AidB_N
Motif
Other DBs
NCBI-ProteinID:
AKJ69853
UniProt:
A0A0G3ERY7
LinkDB
All DBs
Position
complement(270950..272221)
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AA seq
423 aa
AA seq
DB search
MTASFFAYRDQTLFAEDVSLSELAERFGTPLYVYSRAALQAAFEAYAGACVGRNAAVHYA
AKANSNLAVLNVFAQLGAGFDIVSAGELQRVIAAGGDPRRVVFSGVGKSVDEMRFALAQD
VMCFNVESRPELVRLNEVAGSVGQRARVSIRVNPDVDAKTHPYISTGLRSNKFGVAFDEA
LSTYRDAAALPHLEIVGIDCHIGSQITEIAPYLDALDKVLELVEQLEREGISIHHLDVGG
GLGIRYADEAPPAIGTFATALLDHVAKRGHAHRTVLFEPGRSLVGNAGVLVTRVEYVKPG
EAKNFAIVDAAMNDLARPAMYEAYHDIVPVTRNSTAPALNYDIVGPVCESGDWLGRDRVL
RVTQGDLLAIRSAGAYGFAMSSNYNTRPRAAEVMVDGANAHLVRARETIESLFAGESVLP
KDA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcctttttcgcctaccgcgaccaaacgcttttcgcggaggacgtttcgctg
tcggagctggccgagcgtttcggcacaccgctttatgtctattcccgcgccgccctgcaa
gcagcgttcgaggcctatgcgggcgcctgcgtcggccgtaacgccgccgtccattatgcc
gccaaggccaattcaaatctcgcggtgctcaacgtgttcgcgcagctcggcgccggtttc
gacatcgtatcggccggcgaactgcaacgcgtcatcgctgcgggcggcgacccgcgccgc
gtggttttctccggcgtgggcaagagcgtggatgaaatgcgctttgcgctggcccaggac
gtgatgtgcttcaacgtcgagtcgcggcccgaactcgttcggctcaacgaggtggccggc
agcgtcggacaacgggcgcgtgtgtcgattcgcgtgaaccccgacgtcgacgccaagacg
cacccgtatatttcgaccggactgcgcagcaacaaattcggcgtggcgttcgatgaggcg
ctgagcacttatcgcgacgccgcggcactgcctcatctggagatcgtcggcatcgactgc
cacatcggctcgcagattaccgagatcgctccctatctggacgccctggacaaggtgctg
gaactggtcgagcagctcgagcgcgaaggtatttccattcaccacctcgacgtcggcggc
ggcttggggatccgctatgcggacgaagcgccgcccgcgatcggcacctttgcaaccgcg
ctgctcgatcatgtggccaagcgcggtcacgcgcaccgcacggtcctgttcgaaccgggg
cgctcgctggtcggcaatgccggcgtgctggtaacgcgcgtcgaatacgtcaagccgggc
gaggcgaagaactttgccatcgtggatgcggcgatgaacgatctggcacgcccggccatg
tatgaggcctatcacgacatcgtcccggtgacgcgcaacagcactgcgccggcactcaac
tatgacattgtcggcccggtgtgcgaaagcggcgactggctggggcgtgatcgtgtgctg
cgggtcacccagggcgacctgctcgcgatccgctcggcaggcgcttatggcttcgccatg
agctcgaactacaatacccgcccgcgcgcggccgaagtgatggtggacggcgccaacgcg
catctggtgcgggctcgcgaaaccatcgaatcgctctttgccggcgagagcgtgctgccg
aaggacgcctga
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